Carassius auratus (goldfish): 113119909
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Entry
113119909 CDS
T07313
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08525
retinoid X receptor beta
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03320
PPAR signaling pathway
caua04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
113119909
03320 PPAR signaling pathway
113119909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113119909
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113119909
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
113119909
Nuclear receptors [BR:
caua03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
113119909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
113119909
NCBI-ProteinID:
XP_026145411
Ensembl:
ENSCARG00000004767
UniProt:
A0A6P6RIW3
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All DBs
Position
19:24634145..24652843
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AA seq
480 aa
AA seq
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MGDSRDSHSPDSSSVSSPPSGQRSPSLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINMFRRNTEINSTVSMSGLHAVSSSDDVKPPFGLKQMS
AHSPGPMLSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKHRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtagagattctcatagtccagacagctcatccgtttcctcgccaccatca
ggtcagcgttcgccctcgttggccccttcagccgccgccatgacttcccttccacccatc
acttcggctgtgaacagtcccatcagcagcatgggctcacctttctcagtcatcagctcc
tctctgggttctccctgccttcctggaactccctcggtaggctacggccccatcagcagc
ccacagattaacatgtttcgcagaaacacagagatcaactccaccgtgtccatgtcgggt
ctgcatgccgtcagcagctctgatgatgtcaaaccacccttcggtttgaagcagatgtcg
gcccacagccctggacccatgctctctcagaaacgcttgtgtgccatctgtggagatcgc
tcttctggcaagcactacggcgtgtacagctgcgagggctgcaagggctttttcaagcgc
actgtgaggaaggacctgagctacacatgcagagacagtaaggactgtctggtggacaaa
cgccagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
agagaggtggtccaagatgaacgacaacgatccgttcaagaggagcgtcagaggaacaag
gagcgagagggagaggtggagtccaccagcgcagcgaatgaagagatgcccgtggagaag
attctggaagcagagatggctgtggagcagaagactgagctgcatgcagacggcagctca
ggaggaagctcaccaaatgaccccgtcacaaatatctgccaggcggctgacaaacagctg
ttcactttggtggagtgggcaaagcggatccctcacttcagtgagctgtctctggatgac
caggtcatcctgctgcgagctggctggaatgagctgctgatcgcgtctttctctcatcgc
tctatcgcggtgaaggatggcattctgctggccaccggcctccacgtgcacaggaacagt
gctcacagcgctggggtgggagccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggtgctgacggagctggtgagcaagatgagggacatgcagatg
gataaaaccgagttgggctgcctgagagccatcatcctcttcaacccagatgcgaaggga
ttgtcaagcccaagtgaagtggagttactgagagagaaggtctatgcatcgctggaggct
tattgtaaacacagatatcctgaccagcagggcagattcgccaaactcctcctccgactg
ccagcgctgcgctccattggtttaaagtgcctggagcacctgttcttcttcaagctgatt
ggagacaccccaatcgacaccttcttaatggaaatgcttgaagcaccacatcagctcacc
taa
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