Carassius auratus (goldfish): 113120088
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Entry
113120088 CDS
T07313
Name
(RefSeq) TBC1 domain family member 5-like isoform X1
KO
K18469
TBC1 domain family member 5
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113120088
Membrane trafficking [BR:
caua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113120088
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3573
Motif
Other DBs
NCBI-GeneID:
113120088
NCBI-ProteinID:
XP_026145742
Ensembl:
ENSCARG00000020443
UniProt:
A0A6P6RJZ7
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All DBs
Position
19:complement(27739196..27757228)
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AA seq
884 aa
AA seq
DB search
MQHPNFETRHPLQQEEQETGYDPLQNYNRNRERGSLDSAFESTFQSYRKEWDSLFQNSNY
LAQIRQAGINGQLRSSRFRSVCWKLYLDVLPEDKTRWISRTKEHRAQYEKIKETHITNPR
KAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRAMIKQDVLRTFPEMLYFQEEDVRTKLTD
ILFCYARENEQLLYKQGMHELLAPIVFVLHGDHQAFQHASETANPRSDLFTTQTRPSEDL
LKLKFPFVSVEEMKVLLDPKFHEHDAYAMFSLLMETAEPWFSSFEREVRKGKEEMLTSIP
FARPQDSGPSVAIVTKVNRIQDQLLKKHDIELYMHLNRLEIAPQIYGIRWVRLLFGREFS
LQDLLVVWDALFADSITLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHSL
LLKALFLRDPKNNPRPVNYQFQQNLDYYKTRGADLVNKTRASTKVAPLNINKVSSSLLNF
GRKLIAPMGGVSSGISPINSEVISAPPPQAPVPHPLAEPSPCTAPSNTQIKSQLFPQTHH
QHRLLKSESMPVHLSKDVGSCGASQISLPAQIHSDTPGHTSRTVSSSPSTESLSGGRDHA
MSSPPLSVSRGRDSSTSSPPPSATKKDSFLNISRSRSHSKTINKKDVEELEAQVSFLQGQ
INDLEAMSKYCAKMMNMHIGKIQDVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQS
ELELEENEITIADDHYCSSQYSTLKDQSDPDNLSEDTAGSTIIQQKTPEQSNHQEGDVVA
EIEEDEQEEEKVLTTENIATVPEPQATEGRNWDDYILVLQDDEPSESEEQSITTTAPLFK
HVQGLNKVDFQDPLMGTTSGSSSPDDSSTHSKDSDFTIVNPTDV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatccaaacttcgaaacacgacacccgctgcagcaggaagagcaggagaccggt
tacgaccctctacagaactacaacaggaacagagagcgaggatcactggatagtgctttt
gagtccacgtttcagtcatacagaaaggagtgggatagtttgttccagaacagtaactat
ctggcgcagatcaggcaggctggtattaacggacagctacggagcagccgattccgcagc
gtatgctggaagctttatctggacgtcctgccagaagataagactcggtggatcagtcgt
accaaggagcacagagcccagtatgagaagatcaaggagacgcatattacaaaccctcgc
aaagctgctggccaacaggacctggtggtgaacaacccactgtcacaggatgaagggagt
ctatggaataagttctttcaggacaaggagctcagggccatgatcaaacaagatgtttta
cgaacgtttccagagatgctgtacttccaggaagaggatgtcaggacaaagctgactgat
attctcttctgctatgcacgagagaacgaacagctactctataagcagggcatgcatgag
ttactggcccctatagtgtttgttctccacggtgatcaccaggcgtttcaacatgccagt
gagacggccaatcccaggtctgacctatttaccacacagacaagaccgtctgaagacttg
ctgaagttaaagtttccatttgtttctgttgaagagatgaaagtccttctggatcctaaa
ttccatgagcatgacgcttatgccatgttttcactgctcatggagacagcagaaccctgg
ttcagcagttttgaacgggaggtcagaaagggcaaagaagagatgttaaccagcatcccc
ttcgcaagaccacaggactcgggcccttctgtggccattgtgaccaaagtcaaccgaatt
caggaccagctactaaagaaacatgacattgagctgtacatgcacctcaacagactagaa
atagctccccagatttatggcattcgctgggttcgactgctgtttggtcgggagttttcc
ctgcaggatctgttggtggtctgggatgctctttttgccgacagcatcactttggacctg
gtggattacgtgtttgtcgctatgcttctgtacatcagagatgcattgatcgctagtaac
ttccaaacgtgtctcgggctcctgatgcactatcctcctattggagacatccactctctg
ctgctgaaagcactctttctcagagaccctaagaataatccaagacctgtaaactaccag
ttccagcaaaaccttgattactacaaaacccgtggggccgacttggtcaacaagactcgg
gccagcactaaagtagcacctctcaacattaataaagtatccagttctcttcttaatttt
ggccggaagctcatcgcgccaatgggaggtgtctccagcggcatttcgccaattaacagt
gaggtgatatcagctcctccccctcaagctcctgtgccacacccattggccgagccttca
ccatgcactgccccctccaacacgcagataaaatcacagctatttccgcaaacgcatcat
cagcaccggttgctgaagtctgaaagtatgccggtgcacctcagcaaagatgtaggttct
tgtggagcttctcagatatctctccctgcccagattcactctgataccccaggccacacc
tccaggacagttagctcctcccctagcactgagagtttgtctggtgggcgggatcatgca
atgtcttcccctcctctgtcggtgtccaggggccgagactccagcacatcatctcctccc
ccctctgccacaaagaaagactctttccttaatatcagtcgctcgcggtcccacagtaaa
accataaataagaaggatgtggaggagttggaggcccaggtctcattcttacagggtcag
attaatgacctagaggccatgagtaaatattgtgccaagatgatgaacatgcacataggc
aaaattcaagatgtgatactgcaggagcatctggagaaggaagatgaggttctagtgtca
cttgctggactaaaacagattaaggacatcctgaagggggctctccgtttcaaccagagc
gagctggagttagaggagaatgagatcaccatagcagatgatcactactgctctagccag
tatagcacactaaaggaccagagtgatccagacaatttgtctgaagacacagctggttct
actatcatacagcagaagacaccagagcagagcaaccaccaggaaggagacgtggtagcc
gagatagaagaggacgagcaggaggaggaaaaggtcttgacaactgagaacatcgccaca
gtaccagagccacaggccactgaagggagaaactgggacgactacatcttggtcttgcag
gatgatgagccatctgagagtgaagagcaaagcataaccaccacagctccactctttaag
cacgtacaaggcttaaacaaggtggattttcaagaccctctgatggggaccacatcgggg
tcctccagtccagatgacagcagcactcacagcaaggactctgatttcactattgttaat
cctactgacgtttga
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