Carassius auratus (goldfish): 113120135
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Entry
113120135 CDS
T07313
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113120135
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113120135
Enzymes [BR:
caua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113120135
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C64
113120135
Ubiquitin system [BR:
caua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
113120135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
113120135
NCBI-ProteinID:
XP_026145858
Ensembl:
ENSCARG00000002656
UniProt:
A0A6P6RL64
LinkDB
All DBs
Position
2:complement(20539808..20546372)
Genome browser
AA seq
1102 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVPGPPKKGSELVKVLGLSNYHCKLLSPVLTRYGMDKQTGTAKLLK
EMNQGEIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNIDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIHKYVS
LDSSGSCVIGGDRSLQEKYLLRLVGAMEDVFMEKHSIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHVPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLSTLTACTWCHGTSVRRVCGDGSVVYLDGDRTNTRSEGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEMDQTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQEEYNPVAIEGAHVQDGRDGSESATHPPTKI
ILTGQKGKTLHKEELVMSKTERVLQHSISEQAALSQRRSTDRLRQQDSRLSFPSSSSSSA
PSTPTKVPASSGEKKIRVTTSDGRQAMLTLQPHTTYAELQNSIIQVFNLSSGQLCIRHGF
PPKELPPPRPEDQNQPVALQHGDRISVEVLKESSPETHMTQTQTPQTHTHSDPRLSRTSS
REIQENIDLEMSSLCLLAALMGEDIWTYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHCTL
PHLLGKTFVFNAAEERLELCVDTAGHFPVGPDVEELVQEALSQLHSDAASRSREGSPAHG
LRLGAGGAVRRKEQNVTAFQGKGHSLGSAPPIRRQHSSGVDLSGSVQGEGLTLSGEELVR
VAPGMLTLREGRGLGLEPAVIEAQRQRLQEMVSSIQASMDKHLCQHAAVRQDAKEEEAPD
KQEDMESHGAEPPSTFEPMDQS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcgaaacagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
actgagtgcggccagagacacgaacagaagaacctcgcgaatgtggaggaagtgactgac
ccagatgtagtgcttcataatttgctgagaaacgctttgctgggtgtgccaggccctcct
aaaaagggttcagagctggtgaaagtgttgggactgtccaactatcactgcaagctgctg
tctcccgtcctcacccgctatggcatggacaaacagacaggcactgccaaactcttgaag
gaaatgaaccagggagagatcttcgactgctcgcttctcggggaccgggcatttctcatc
gagcaagagcatgtgtccactgttgggtatggacgagaccggtcaggaagcctgatctac
ctgcatgacactttggaggagatcaagaaagcaaacttaaatagagagtgtcttattcct
gtgcatgtggacggagacggacactgcctggtccatgccgtgtccagggcattagttgga
cgtgaactcttctggcatgctcttcgagaaaacctgaagctcaatttcaaacagaacata
gaccgctacaaagctcttttccaggactttatagatgctgcagaatgggaagacattatt
aatgagtgtgacccattgtttatccctccagaaggcgttccattgggtcttaggaatatt
cacatttttggcctggcaaatgtactgcacagacccataatcctgttggactcactgagc
ggtatgcgcagctcaggcgattactccgccactttcttgccaggcctggttccagaggag
cagtgccgaggaaaagatggcactctgaacaagcccatctgcatcgcctggagtagctct
ggcagaaatcactatctacccctagtgggcatcaagggcttgcctttgccccgtttacct
gctgcacttctcccaaaagcttggggtgttcctcaagagctgattcacaaatacgtgagt
ttggactccagtggaagctgtgtgatcggcggcgacaggagcctgcaggagaagtacttg
ctgcggctcgtaggcgcaatggaggacgtcttcatggaaaagcacagcatccaccctgct
ctagtcgccgacgtccaccagtacatatatcgacgcactggagtgatcggcgtgcagcca
gaggaggtgactgaagcggctaagaaatccgttcaggagggtcgtctccaccgctgcctt
gtctgcaatgccctctcggagctccacgtgccagcagagtggctcataccgggagggaaa
ctctacaacttggccaagtcgactcacggtacactacgagcggacaaaaactacagcttt
cctttaaatagtttggtttgttcctataacccagaaaaagatgtgctggtgcccgactac
aaactcagcacactcactgcctgcacctggtgtcacggaacttcagtgcggcgcgtttgt
ggcgacggctctgtggtctatttggatggagaccgtaccaatactcgctccgagggtggg
aagtgcggctgtgggttcaaacacttctgggagggcaaggagtacgacaatcttcctgaa
gcttttcccatcactctggagtggggcggccgtgtggtgcgtgagacagtttattggttc
cagtacgaaatggatcagactctcaacagcaatgtttatgatgtaacgatgcgtctcgtc
acaaaacacttccccggtgagttcggcagtgagattctggtccaaaaagtggtgaacact
attttgcatcacaccgccaagaggagccaagaagaatacaatccagtggccatcgaaggt
gctcatgtgcaggacgggagagacgggagtgaatctgccactcaccctcctactaaaatc
atcctgactggacagaagggcaaaaccctgcataaagaggaactggtgatgagcaaaact
gagagggtcttgcagcacagcatcagcgagcaggcggccctgtcccagcgccgcagcaca
gaccgcttgcgccaacaggattctcgcttgtcatttccttcctcttcatcatcctctgca
ccttccacgcccaccaaagtgccagcctccagcggagagaagaaaatccgtgtaacaacc
agcgacgggcggcaggccatgcttacgctgcaaccgcacaccacctacgctgagctccag
aattccatcatccaggtcttcaacttgtcgtccggacagctgtgcatccgacatggcttc
ccacccaaagagctgcccccgccgcgtcccgaggaccagaaccagcccgtggcgcttcag
catggtgaccgcatctctgtggaagtgctaaaagagagttctcctgaaacgcacatgacc
cagacgcagacgcctcaaacgcacactcactctgacccacgactcagccgcaccagtagc
agggaaattcaggaaaacattgacctcgagatgtcatcactgtgtctcctggcagcactt
atgggtgaagatatctggacatatgccaagaaactgcctcacctgttccaacaaggaggg
gtcttctacaatattgtgaagaaagacatgggtctgttggacgggaagcactgcacactg
cctcatttgttgggtaaaacgtttgtgttcaatgctgcagaggagcgtttggagctgtgt
gtggacacagccggccattttccagtgggccctgatgtggaagagctcgtccaggaggcc
ctttcccagctccactcagatgcagcctcccgtagccgtgagggaagccccgcgcacggc
ttgcgactgggcgccggtggtgctgtgcgcaggaaagagcagaacgtcacggccttccag
ggcaaaggtcactcgttgggttccgccccaccaatcaggcggcagcacagcagcggcgtg
gatctcagcggcagcgttcaaggtgaagggttaacgttgtcaggggaggagttggtgcgt
gtggccccgggcatgctcactttacgcgaggggcgcggtttagggctggagcccgccgtg
atcgaggcccaacggcagcgcttgcaggagatggtctcaagcatacaggcatccatggac
aaacacttgtgccagcatgctgcagtaaggcaggatgcgaaggaagaagaggctcctgac
aaacaggaggatatggaaagtcatggtgcggagcctcccagcacctttgaacccatggac
cagtcttga
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integrated database retrieval system
