KEGG   Carassius auratus (goldfish): 113120161
Entry
113120161         CDS       T07313                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113120161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113120161
Spliceosome [BR:caua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113120161
 Complex B
    113120161
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 113120161
NCBI-ProteinID: XP_026145890
Ensembl: ENSCARG00000031780
UniProt: A0A6P6RKS2
LinkDB
Position
19:29248796..29256274
AA seq 476 aa
MSDFDEFERQLSENKQGDRLNGHERDKENRHRRRSPSRSRSRERKRRSRERRSRERRSDS
KDRRHRRSDHTQNHPQDNVSRSPHREKKKMKIKKYWDVPPPGFEHVTPMQYKAMQAAGQI
PATALLPTITPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLG
GLTQAPGNAVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQAQSLKIRRPHDYQPLP
GMSENPSVYVPGVVSTVVPDSIHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSAT
GLSKGYAFCEYVDVNINDQAIAGLNGMQLADKKLLVQRASVGAKNATMTSINEIPVTLQV
PGLMTNPMVQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQSLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtctgattttgatgaatttgagagacagctttctgaaaacaaacaaggtgacaggcta
aacggtcatgagcgggacaaagagaaccgtcaccggcgacgcagcccatcacgcagccgc
agtcgagagaggaaaaggagaagcagagagaggagaagtagggaacgccgcagtgacagc
aaggaccgccgccatagacgcagtgatcatactcagaaccatccccaagacaatgtcagc
cgttctcctcaccgagagaaaaagaagatgaaaattaagaagtattgggatgtaccgcct
cctggctttgagcatgttacacccatgcagtacaaggccatgcaagctgctggtcagatc
cccgctacggctttgctgcccaccataacgccagacggcctggcagtaacgccgaccccg
gtacccgtagtgggcagtcagatgactcgccaggctcgcagactttacgttggcaacatc
ccatttggcatcacagaggaagctatgatggacttcttcaatgcccagatgagactcggc
ggtctgactcaggcccctggaaacgctgtcctcgccgtccagattaaccaggacaagaac
tttgctttccttgagttccgatcggtggatgagaccacgcaggccatggcatttgatggg
atcatcttccaggcgcagagtttaaagattcgccggccgcacgactatcagccgttacct
ggcatgagcgagaaccccagcgtatatgtcccaggtgtggtgtccactgttgtaccagac
tccattcacaagcttttcattggtggtttgccaaactatctcaatgacgaccaggttaaa
gagttgttaacttcttttggaccgctcaaagcctttaatttggttaaggacagcgccacc
ggcctctcaaagggctacgctttctgtgaatatgtggatgttaacattaatgatcaggct
attgcaggactgaatggtatgcagctagcagataagaagctgctggttcagagggcaagt
gtaggagccaaaaatgccacaatgacaagtataaatgagattccagtgacgttgcaagtg
cctgggctcatgacgaaccccatggtgcagatgggtggtattcccaccgaggtcctgtgc
ctgatgaacatggtggctccagaggagctcctggacgatgaggagtacgaggagatagtg
gaggacgtcagagaagagtgctccaaatatggccaggtcaagagcatagagattccccgg
cctgtcgatggccttgaggtccctggaaccggcaagatctttgtggagttcacatctgtt
ttcgactcccagaaagccatgcagtccttaacggggagaaagttcgccaaccgggtggtg
gtgaccaaatactgcgatccagatgcttaccaccgccgagacttctggtag

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