Carassius auratus (goldfish): 113120163
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Entry
113120163 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113120163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113120163
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113120163
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113120163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
113120163
NCBI-ProteinID:
XP_026145894
Ensembl:
ENSCARG00000031829
UniProt:
A0A6P6RJL2
LinkDB
All DBs
Position
19:29257994..29276158
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AA seq
895 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLYNAANTNQKEKYESDLKKEIKKLQRLRD
QIKTWVASSEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTKKKKGDKEKQDRIEELKRMIERHRYHI
LMLETILRMLDNDSIQVDAIRKIKDDVEYYLDSSQDPDFEENEFIYDDIDLEELPQPLVA
TSPGNTEDDIFQPSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEISQSPIKNG
NPSLSLSSSSSSSSSSSSSSSSSSGASSNALISMATVASSISSASGSSSLLGNMGGPLQN
SGSYSSATQQQTPQSQQQHQPKNSVSSLSNTNSASSSNSTLLPTSTSVSPPNTSTLGPLT
PISQSQPPLGTGLSSSLGLGKGQSVTSGTNQMPSLVLSGMPASLNSMTGFLSGSTPAPYA
QAAAAGCVGSGLSASIGTNISSTNSSGVVTSMGSNGSLGSTSLLGSGTGVLGLGFTQSAL
EPLPMVASSSVGGALTSGSNVGVIGSNGGTSGTGNAVGNAVLPRPPSGPKQNGGTSYSAV
VGDSMSDTALNSASQPQISQSSSSNSSTNQPKDSVSSLLGSMTLPPSSPSPSYSESKAGG
GSLLNGPHSYTQAADTIKPQEPPSSLKAMAERVAQGSGLEGDLSALHISSDIFPSSTAPS
GTPAAPQSALSEVSIPPSLGVCPLGPVPLSKEQLYQQAMQESTWTHMPHPSDSERIRQYL
MRNPCPTLPFHQQMPPAHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRF
HTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagaccgatgtttgaaaaaagttgcagaa
ggggtagagcagtttgaggacatttggaaaaagctctataatgcagccaacaccaaccaa
aaagagaaatatgaatctgacctcaagaaagagattaaaaaactacagcgtctccgtgac
cagattaagacatgggtcgcctccagtgagatcaaagacaaaagacagctagtagagaat
cgcaaactcatcgagacgcaaatggagcgatttaagattgtggaacgggagaccaaaaca
aaagcgtattctaaagaaggacttggcctcgctcagaaagtcgatcctgcacagaaagag
aaagaagaggtcggccagtggctaacgaacacgatagacacgttaaacatgcaagtggac
cagttcgagagcgaggttgaatcgctttctgtgcagaccaagaagaagaaaggagacaaa
gagaagcaggaccggatcgaggaactgaaacgaatgatcgagaggcaccggtatcacatc
ctcatgctggaaaccatccttagaatgctggacaatgactcgatacaggtggatgccatc
cgcaagattaaagatgatgtcgagtactaccttgattcctctcaggatcctgactttgag
gagaatgagtttatctatgatgacattgatttagaggagttgccccagccactagttgca
acatcaccaggtaacacagaggatgacatcttccagccctccagttccacaccgacctcc
acaacgtcgtcatctcccatacctccttctccagctacttgcactacgaattcggaagat
gataagaaaagaggtcgttcaacagacagcgaaatcagccagtcacctatcaagaatgga
aatccgtctttatctctatcttcatcttcctcctcctcatcatcgtcttcgtcatcatca
tcctcttcctcgggagcctcttcaaatgctttgatctccatggcgactgtcgccagcagc
ataagctcggcatcagggagcagcagcctcttaggcaacatgggcggccccctccagaac
tctggcagctatagttcagcaacccagcaacaaacaccgcaatcccaacaacagcaccag
cccaaaaactcagtctcctctctctccaacaccaactcggcctcctccagcaacagtacc
ttactcccaacatccacctccgtgtcgccgcccaacaccagcacactgggcccactgaca
cccatctcgcagagccaacctccattgggaactggcctttcctccagtctgggccttggg
aagggacagtctgtgactagtggcacaaaccagatgcccagtctggttctttcagggatg
ccggcatccttgaacagcatgactgggtttttgagcggatccaccccggcaccttatgca
caagcggccgcagcaggttgtgtgggcagcggactgtcagcatcaatcggaacgaatatt
agcagtactaactccagtggagtcgtgacctcaatggggtctaacggaagtctaggctcc
acaagcctcttgggctcagggactggtgttctgggtcttggattcacacagtccgctctg
gagcctttacctatggtggcttccagctctgtgggaggcgcactgacctcagggagcaac
gtgggagttatcggaagcaacggaggaacctctgggactggtaacgcagtgggaaatgct
gtgctaccacggcctcctagtgggccgaaacaaaacggcggaacaagttatagtgctgtg
gtaggagacagcatgtcagacaccgccctcaacagtgccagccaaccacagattagccaa
tcctcatcctcaaattcctcaacgaatcagcctaaggacagtgtgtccagcctcctgggg
tcgatgacactgccgcccagctcgccctcaccgtcatacagtgagagtaaagcaggtggt
ggcagcctgctgaacggcccgcactcatacacacaggcggctgacaccatcaagcctcag
gagcctccgagctctttaaaggcgatggcagagagggttgctcagggttcagggttagaa
ggagatctgtctgcactacatatctcaagtgatatatttcccagctccacggccccttca
ggcactcctgcagctcctcagtctgctctgtcagaggtgagcatccccccatcattgggt
gtgtgtccactgggccccgtccccctgtccaaagagcaactctaccagcaagccatgcag
gagtccacctggacgcacatgcctcacccgtccgactcggagaggatcaggcagtacctg
atgaggaacccctgcccaacactgccttttcaccagcagatgccacctgctcactctgac
actgtggagttctaccagagactgtctacagagaccctcttcttcatcttttactaccta
gagggtacaaaagcacagtatctagcagccaaggccttgaaaaaacaatcatggaggttc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgacgag
tttgaacaagggacatatatttactttgactatgagaaatggggccagagaaaaaaggaa
ggatttacatttgagtacaggtaccttgaagaccgggacctccagtga
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