Carassius auratus (goldfish): 113120295
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Entry
113120295 CDS
T07313
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113120295 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113120295 (exosc7)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113120295 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
113120295 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
113120295
NCBI-ProteinID:
XP_026145986
Ensembl:
ENSCARG00000014352
UniProt:
A0A6P6RKG5
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All DBs
Position
19:25637625..25641426
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AA seq
291 aa
AA seq
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MAAVQVSEAEKVYIMHGVRDDLRLDGRGCEDYRHMEIETDVVSNTDGSAKISLGHTDVLV
GVKAEIGKPRAMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNNRHSVD
LRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDEEGVKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLLISVTHRGTVTCVR
KMGGGSLDPESIFEMTEAGKRVGKALHAPLMELLQKEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcaagtaagcgaagcggagaaggtttatattatgcatggagtccgtgat
gacctgagactggacgggcgaggatgtgaagactacagacacatggagatcgagacggat
gtggtgtcaaacactgatggttctgctaaaatcagtcttggtcacacagatgttcttgta
ggagttaaggcagagattgggaaacccagagccatggtaccagatgaaggctatctggag
ttctttgtggactgctcagcgaacgccactccagagtttgaggggcgtggaggggaggag
ctgggggtggagcttagtaacacgctctataaagtgttcaacaacagacacagcgtggac
ctgcgttccctctgcatctgtccgggagagaactgctgggtgctgtacgtggatgtgttg
ctgctgcagtgtgatggaaacctgtttgatgccatatccattgcgataaaagctgctctg
tttaatacacgaattcccaaagtgcacatatctgaggatgaggagggagtgaaggagatc
gagctgtcagacgacccttacgactgcatgcggctcaatgtggaaaatgtgccatgtatc
gtaaccctctgcaaggttggtcacagacatgtggtggacgccacgctgcaggaaaaggcc
tgctctgtggccagtctcctgatttcagtcacacaccgagggacggtcacgtgcgtcagg
aaaatgggaggaggaagtctggacccagaaagtatctttgagatgacagaggctgggaag
cgtgtgggcaaggctcttcatgcgcctctcatggagctgctgcagaaagaagaaagtctt
ggcaagaaacggcagaaagtgggattcctcggatag
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integrated database retrieval system