Carassius auratus (goldfish): 113120483
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Entry
113120483 CDS
T07313
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113120483
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113120483
Membrane trafficking [BR:
caua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113120483
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113120483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113120483
NCBI-ProteinID:
XP_026146101
Ensembl:
ENSCARG00000006255
UniProt:
A0A6P6RKT3
LinkDB
All DBs
Position
2:21525595..21533540
Genome browser
AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNSVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEIQQGNLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYSIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSEKVAASQETNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLREAFVAEQYLRETCLGKTRPATDYPLVTPNEERNVLEEA
TGYEPKGIIPTPTQQVKDAEDDPEDVGVLASVTAAVSAPVVAAVPTVSHAESQPAEKTKK
ELPKVTAAEQKIIDELEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaaactctcagcccgatctgaccgtgtcaaaagc
gtagaccttcatccatccgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccatgaaacacagactctggttaagacttttgaagtctgtgaccttccagta
agagcctcgaagtttgtggccaggaaaaattgggtcattactggtgctgatgacatgcaa
attcgggttttcaactataatacactagagagagtacatatgtttgaggcccattcagat
tacattcgctgcatcgctgttcatcccacccagccctacatcctcacaagcagtgatgac
atgttgataaagctctgggactgggaaaagaaatggtcctgcagtcaggtgtttgagggc
cacacacactatgtcatgcagattgtcatcaaccccaaagacaacaaccagtttgcgagt
gcatcgctggacagaaccattaaggtttggcaactgggctcttcctctcctaacttcact
ttggagggccatgataagggggtgaactgtatcgattattacagtggaggagataaaccc
tatctcatatctggagctgatgacagactggtcaagatttgggactatcagaataagaca
tgtgtgcagacgctcgagggtcacgctcagaatgtgtcctgtgtaaacttccacccagag
ctgccaatcatcatcactggatctgaggatggcacagttcggatctggcactcaagcact
tatcgtctagagagcaccctgaactatggtatggagcgggtgtggtgtgtgtgtggcttg
cgcggctccaacagtgtggcattgggctatgacgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggataccagtggaaaaatcatttgggccaagcactct
gagattcagcagggtaacctcaaagccatgggggatgctgagattaaagatggcgagagg
ctgccactggcagtgaaagacatgggcagctgtgagatctatcctcaaaccattcagcac
aatcctaatggaaggtttgtggtggtttgcggagatggagagtacatcatctacactgcc
atggctttaagaaataagagctttggatctgcacaggagtttgtctgggcccatgattca
tctgagtattcaattcgggaaagcagcagcgtggtgaagatcttcaaaaattttaaggag
aaaaaatcttttaagccagactttggagcagaaggcatctatggtggtttcttgctgggt
gtccgatcggtgaatggcttggctttctatgactgggataacacagagctgattcgccgc
attgagatccaacccaaacatattttctggtccgactctggggagctggtgtgcattgcc
acagaggagtctttcttcatcctgcgctatatgtcagagaaggtggctgcatcacaggag
acaaatgagggggttactgaagatggtatcgaagatgcttttgaggtccagggagagatt
caggaagtggtaaagactggtctgtgggtaggagactgtttcatttacaccagctcagtc
aacagactcaactactttgttggaggagagattgtcactattgctcacctggacagaacc
atgtaccttctgggatacattcctaaagatgaccgtctttacctgggcgataaggagctg
aacatagtgagttactctcttctggtgtctgtcctggagtaccagacagctgtcatgcgc
agagactttggcatggcagacaaagtgctgcccactatccctaaagaacagaggaccaga
gttgcccacttcctggaaaaacagggtttcaagcagcaggctctggccgtgtcctctgat
ccagagcaccggttcgagctggcgctacagttaggagagctgaaaattgcttatcagcta
gcagtagaagctgagtcagagcagaagtggaagcagttggcagagttggccatcagtaag
tgccagtttagtttggcacaggagtgcctccatcatgcacaggactatggaggacttctg
ctcctggccacagcatctggcaacgccgctatggttgccaagcttgcagaaggggcagag
cgtgatggcaaaaacaatgttgccttcatgacctatttcctgcagggaaaactggacaac
tgtttggagctcctgatcaagacaaatcgtctgccagaagcagcctttcttgcccgcaca
tatctgcccagccaagtgtccagggtggtgaagctttggagagagagcttgtctaaagtg
aatcagaaagctgcagagtctctggcagaccccacagagtatgagaacttattcccaggc
ctgagagaggcctttgtggcagagcagtatctgagagagacctgcctcggcaaaaccaga
cctgccactgactacccactggtcacgcccaatgaagaaaggaatgtgctggaggaggcc
actggttatgaacccaagggaattatccccactcccacacagcaggtgaaggatgcagaa
gacgacccagaggatgtgggtgttttggcctcggtgacggcagccgtctcggctccggta
gttgcagcggtgcctactgtgagtcatgcagaatcccagcctgctgagaagacaaagaaa
gagcttcccaaagtgacagcagccgaacagaagattattgatgaattggaggatgatttg
gataacatggagcttgatgacattgacaccacagacgtcaatctggatgacgacttctta
gacgactaa
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