Carassius auratus (goldfish): 113120553
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Entry
113120553 CDS
T07313
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua00100
Steroid biosynthesis
caua01100
Metabolic pathways
Module
caua_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
113120553
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
caua01006
]
113120553
Enzymes [BR:
caua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
113120553
Prenyltransferases [BR:
caua01006
]
Terpene biosynthesis
Squalene/phytoene synthase
113120553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GST_C_8
Motif
Other DBs
NCBI-GeneID:
113120553
NCBI-ProteinID:
XP_026146205
Ensembl:
ENSCARG00000036696
UniProt:
A0A6P6RLN1
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All DBs
Position
20:3060347..3072996
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AA seq
444 aa
AA seq
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MAVVGGKSAAPFSVIKRSLSLRSVLSGGRRSAQEGRLVTRASHPLRTHRHPSFVCFSCQD
SMSETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLEKKV
PLLQDFHTFLYQPEWSFSESREKDRQVLEDFPTISVEFRNLGQEYREVISDICYRMGVGM
SEFLEKKVSSMQEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGWDTELANSMGLFLQKT
NIIRDYLEDQQEGRAFWPQEAWSQFASRLEDFARPQHLSSALSCLNLLVTDALHHVPDVI
EYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATSMGAV
QSIIAQYSQEILQKVSASDPSREKTLRILSLIREKSLSPAALSSRAHHISPVYISAAMLL
AALSWQYMNAAAGQPPGGADMHGH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcggcggtaagagcgcagcgccgttctccgtgatcaagcgctcgttgtcg
ctgcgctcggtgctctccggcgggcggcgcagtgcgcaggaagggcggctggtgacccgt
gcttctcacccgctccggactcaccgacacccctcctttgtgtgcttctcctgccaggac
tccatgagcgaaaccctgcggacctgctacgcgtatctgaaccagaccagtcggagcttc
gcggcggtgatccaggccctggacggagagctacggcatgcggtgtgtattttctacctg
gttctgcgagctctggacacagtggaggatgacatgagcatcccgctggagaagaaggtc
ccattgctgcaggacttccacacgttcctctatcagccggagtggagcttcagcgagagc
agagagaaagaccggcaggtgctggaggatttccccacgatttcggtggagttcaggaac
ttgggccaggagtatcgcgaggtgatttcagacatctgttaccggatgggtgtggggatg
tccgaattcctggagaagaaggtttcatccatgcaggagtgggacaagtactgtcattac
gtggcgggtctggtggggatcggactgtcccgtctgttctcggcgtcccagctggaggac
gctgaggtgggctgggacacagagctggcaaactccatgggtctgttcctccagaagacc
aacatcatcagagactatctggaggaccaacaggagggaagagccttctggccacaggag
gcctggagtcagtttgcgtcccgtctggaggatttcgctcgtcctcagcacctgagctct
gctctgtcctgtctcaacctgctggtgaccgatgctctccatcacgtcccagacgtcatc
gaatatctgtcccgcctccgcaaccagagcgtcttcaacttctgcgccattcctcaggtg
atggcgatagcgactctgtcggcgtgctacaacaatcctcaggtgtttcagggcgtggtg
aagatccggaagggtcaggccgtgacgctcatgatgcaggccacaagcatgggtgccgtc
cagagcatcatcgcacaatacagtcaagagatcctgcagaaagtgtccgcctcggatccg
tcgcgagagaagactctgcgcatcctgagcctcatccgagagaagagtctgtctccggcc
gcgctctcgtcccgagcgcaccacatctctcccgtctacatctcggccgctatgctgtta
gcggcgctcagctggcagtacatgaacgccgcggccggacagccaccagggggcgctgac
atgcacggacactga
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