Carassius auratus (goldfish): 113120610
Help
Entry
113120610 CDS
T07313
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113120610
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113120610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_26
HTH_31
MCLC
Motif
Other DBs
NCBI-GeneID:
113120610
NCBI-ProteinID:
XP_026146308
Ensembl:
ENSCARG00000048281
UniProt:
A0A6P6RMI5
LinkDB
All DBs
Position
20:complement(4235347..4248792)
Genome browser
AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEIVHALDTLDRLDREHGDKFGRRGPSDSNAT
NSTTSSTTPTSNNTSNAIMASSSTTSTSTQTQFHGNLSPSPSNSYATSPPAVLPSPVSLV
AMAQNGRDALAATPNGKLSPNRYPVNSAAAVRSYGLDGSEEDLDIDDKVEELMRRDSTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ESHGIDVQSPGGHSNSDDIDANDYNEQGCDVTYFEKRGVNRPFGYYRLEPTSPTQDDAGN
HADHQDPISLAVEMAAVNHSILALSRPGGVASEIKTESLDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcactatcgaacagatcgacctgctgcagaga
ctgcggcgtacaggtatgaccaaacccgagatcgtgcacgcgctggacaccctggatcgg
ctcgaccgcgagcacggggacaagttcggccggcgcggcccgtcggactccaacgccacc
aacagcaccacctccagcactacacccacctcaaataacactagcaacgccatcatggcg
tcctcctccaccacttccacatcaacgcaaacgcagttccacggtaatttatcgccatcg
cccagcaacagttacgccacatctccacctgccgtcttaccttcgccggtctctctggtc
gcaatggcgcagaatgggcgggacgctttggcggcgacgcccaatgggaagctgtcgcca
aaccgttacccagtgaacagtgcggcggcggtgagatcgtacgggctggatggctcagag
gaggacctggatatagatgacaaggtggaggagctcatgaggcgggacagcaccctggtg
aaggaggaaatcaaagcctttctgggcaacagacgtatctcacaagccgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggcttctccagcagggctcagatctc
agcgaacagaagaaacgagctttctatcgctggtaccagctggagaagacaacgccaggt
gccacattaaatatgcggcccacccctgtatctctggatgagatggagtggcgtcagact
ccgccccccataagctccgcccccggaagcttccgtctgcgccgaggcagtcgattcacc
tggaggaaggaatgtctcgctgtgatggagagctatttcagtgataatcaatatccagat
gaagccaaacgagaagaaatcgcgaatgcctgcaacgctgttattcagaagccaggaaag
aagttgtctgacttggaaagagtcacatcattgaaagtctacaactggtttgccaaccgg
cgcaaagagatcaagaggagggccaatattgggtcttttttccaagaagccacaatcttg
gagagtcacgggatcgatgtacagagtcctggaggacactccaacagtgacgacatcgat
gctaacgactacaacgagcagggttgtgatgttacctattttgaaaagagaggtgtgaac
agaccctttggttactaccgtctggagcccacctcaccaacacaggatgatgccggcaat
cacgcagaccaccaggaccccatctctctcgccgtggagatggcagctgtcaatcacagc
atcctcgccctgtcccgcccgggaggcgtggccagtgaaatcaagacagagtcactggat
gatgactga
DBGET
integrated database retrieval system
