KEGG   Carassius auratus (goldfish): 113120778
Entry
113120778         CDS       T07313                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113120778
Membrane trafficking [BR:caua04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    113120778
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    113120778
SSDB
Motif
Pfam: LLGL Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd WD40 ANAPC4_WD40 WD40_Prp19 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st EIF3I Lgl_C Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_VPS8 Synaptobrevin WD40_like Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 113120778
NCBI-ProteinID: XP_026146600
Ensembl: ENSCARG00000027250
UniProt: A0A6P6RMT4
LinkDB
Position
20:8104861..8173322
AA seq 1142 aa
MKKFNIRKVLDGLTAVSSPSPSPQLGAKENELIPETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQNGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHL
WNLRQKRPAVLHSLKFNKERITFCHLPFQSKWLYIGSERGNIHIVNVESFTLSGYTIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKRADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIKSPAKPAQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDPFMIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPMMIHESPVTCCEYLADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGSVKFWDASAIMLQVLYKLKTAKVFEK
ARCKEEKPNTEIVDEDPFAIQLMSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQLLE
VRLQYELNDLESPEGGGDQTPAPLTPSTSPSPQTAAPQTHTSTSSNSSDGIRDNIPCLKV
RSSPLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSSYGLVVFGNSNGLAVVDYLQKTV
LLNLGTVELYGSNDPYQRQLRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSVFMSNHQQ
FYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGSIPLDNRDNSFSRSRSSSVTSIDKE
AREAVTSFYFCETYNRKADGGLTPSLWVGTSLGTVLAISLNMPPAGEQRLLQPVIVSPCG
TLVRLKGSILRMAFLDSTGSLFPSAFEPWYEPNAPANGEERDKVRKRRPVSVSPSTSQEL
NENQYAVLCSEKQAKVISLPSQTCVFKHNITETSFVLRADVVQINTGICVACFCANGHIM
TLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQALYLTSPTEIQRITYSQEVCENLQEM
LGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESGAGKAPRSLAQHIPGPGGLEG
MKGAASGIVGDLARARIALDERGQKLSEVEERTAAMMASADTFSKHAHEMMLKCKDKKWY
QF
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatattcgtaaggtgctggacggcttgacggccgtgtcgtccccttct
ccatccccgcagctcggggccaaggagaacgagctcatcccggagacgctccagtctgaa
cacttccagctctgcaagactgtgcgccatggcttcccttatcagccctcctcgatggca
ttcgaccccgtccagaaaattcttgccattgggactcagaatggggctttacgattattc
ggtcgacccggtgtggagtgttactgtcagcacgagagtggagcagccgtcatccagcta
cagtttctcataaatgaaggggctctggttagtgctttggctgatgatagtattcacctg
tggaacctgcgacagaagagaccagctgtgctgcactcactcaagttcaacaaggagagg
ataacgttctgtcatctgcccttccaaagtaaatggctgtacatcggctcggaacgagga
aacatccacattgtgaatgtggagtcctttaccctctcaggatacaccatcatgtggaac
aaagccattgaactgtcctccaaggcccaccccggcccagtcgttcacattagtgacaat
cctatggatgagggcaagctcataataggatttgagtctgggatcgtagtgctgtgggat
ttgaaatcaaagagagctgactaccgatacacttatgatgaggcgatccattctgtggcc
tggcaccacgaagggaagcagtttatctgtagtcactcagacggcacactgaccatatgg
aatataaagtccccagccaagcccgcacagacaatcacgccacacggaaagcagcctaaa
gatggaaaaaagccagagccttgcaaacccattcttaaagtagagtacaagaccacacga
gcaggggatccgtttatgatcttttctggtggtttgtcgtatgacactgttggtcgacgg
ccatgcttgacagtaatgcatggaaaaagcacggcagtactggagatggattatcccatt
gtagatttcctcaccctgtgtgaaacgccatatcctaatgattttcaggaaccctatgct
gtagtggtcctcctcgaaaaggatttagttgttattgaccttgcacaaaacggttaccct
atctttgaaaatccgtatcccatgatgattcatgagtctcctgtgacatgttgtgagtac
ttagccgattgtcctgtggacctcatacctgcactttactctgtcgggtctcgccagaaa
cgacagggctacagcaaaaaggaatggcctatcagtggcggaaactggggcttgggcaca
caaagctaccctgaaataataataactgggcatgcagatggttcagtgaagttctgggat
gcttcagcaataatgctccaggttttgtacaagctgaagacagctaaggtgtttgagaag
gcacgctgtaaggaggagaaacccaacacggagattgtggatgaagacccatttgccatt
cagttgatgtcttggtgtcccgagagccgcatgctttgtgtggctggtgtctctgcccat
gtcatcatatacaggttcagcaaacaagaaatcaccacagaggttgtgcagttactggag
gtcaggttacagtatgagctgaatgatctggagtctccagaagggggaggagatcagaca
ccagctcctctcacaccaagcacctcccccagtccacaaaccgccgccccacagacacac
acctccactagcagcaactcatcagatgggatccgagacaacataccctgcctcaaggtg
cgcagcagtcctctgaagcagtctccagggtatcaggtggagctggtggtacagctggtg
tgggtcagtggagagccaccccagcagatcagcagcttggccatcaactccagctatggc
ttggtggtctttggcaatagcaatggcctggcagtagtggattacttacagaagactgtt
ctgttgaatctgggaactgtggaattgtacggctctaatgatccgtatcagagacaactg
cgatctccccgcaagagccgacagccttctggagggctttgtgacattaacgagggctca
gccacctcagaggatcgctgcaaatcccccacctcagtctttatgtcaaaccatcagcaa
ttctacaatggaggagggagaggagcaaagatgtcacggaaattaagcttgcctactgag
ctaaagccagacttggtcctactctctgtatgtcccccgcggggttctatacccctagac
aacagggacaactccttcagccgctcacggagctccagtgtgaccagtattgacaaggaa
gcacgagaggccgtcacatctttctatttctgtgagacatacaaccgtaaagcagatggc
ggacttacacctagtctgtgggttggcacgtccttgggcacagtcctggcaatttccctc
aacatgccccctgctggagagcagaggcttctgcaaccagtcattgtctccccttgtgga
actcttgtcaggttgaagggcagcattctccgcatggctttcctagattctacagggtct
ctcttcccttctgcttttgagccatggtatgaacccaatgcccctgccaacggagaggag
cgggacaaggtccgtaagagacggccggtgtctgtctccccatccacatcccaggagctg
aatgaaaaccaatatgctgtgctgtgctctgagaaacaggccaaagtcatatccctgccc
tctcagacctgcgtatttaaacacaacatcaccgaaacatcttttgtgctgcgggcagat
gtggtacagataaacactggcatttgtgtggcctgcttctgtgccaatggacacatcatg
accctcagtctgccagggttgaggccactgctggatgtaaattacctacccctgacagat
atgcggatagcgagaacgttttgcttcaccaacctcggccaggccttgtacctgacttcc
cctactgagatccagaggatcacctacagccaggaggtctgcgagaacttacaggagatg
cttggtgagctgtttactccggtggagacgcctgaagctcctaacaggggattctttaag
ggtctgttcggaggaggagcgcagtctctagacagagaagagctcttcggcgagtcagga
gccggaaaagcaccacgcagtctcgctcagcacattccaggtcctgggggtttagaaggc
atgaagggggcagcgtcaggcattgtgggcgatctcgctcgagctcggatagcgttggac
gagagagggcaaaaactgagcgaggtggaagagcggacggcagccatgatggccagcgct
gacacattctccaaacacgctcatgagatgatgttaaagtgtaaggataaaaaatggtac
cagttctga

DBGET integrated database retrieval system