Carassius auratus (goldfish): 113120844
Help
Entry
113120844 CDS
T07313
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04144
Endocytosis
caua04517
IgSF CAM signaling
caua04520
Adherens junction
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113120844
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113120844
09144 Cellular community - eukaryotes
04520 Adherens junction
113120844
04530 Tight junction
113120844
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113120844
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113120844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113120844
NCBI-ProteinID:
XP_026146723
Ensembl:
ENSCARG00000005102
UniProt:
A0A6P6RNW1
LinkDB
All DBs
Position
2:22245742..22310133
Genome browser
AA seq
1350 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHSLVQQAAMRYRRAIAKDEEYWVQVYRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHVGGDGTSASSTGTQSPELFSGEPSTSTPLSAFQPY
LPHSEIEVTTSTLRTNMPLHVRRSSDPALLNLTAMSFSEPGSQPEEPSRKNPTRWSTTAG
FLKPRFSSGTNSLERKDRGVDTYRSLPRDAGQWSNQKEFQREKARSSLSANHPMVDRWLE
RQEQDEEENGRIEPVGRADICLEHMGVRSLNDIVKLVEVSNDGGPLGIHVVPFSGRDRRT
LGLLVKRLEHGGKADVQGLFQENDCIIQINNGDLRNVRFEQAQNMFRQAMHSPVILFHVV
PTTMRSLYEQISHNEHNPRVNIDLSGRFSPDSLTNDPVGLDHAAHRLAQHMPHPPNNHLD
TSSPIRHPVGSSGKPPSGHSSSPQRGLSPAPTTGFTKKVGRRLGIQLRKGPEGLGFSITS
RDVPLGGSAPIYVKNILPRGAAIQDGRLKAGDRLLKVNGVDLNGRGQEEVVSLLRATPMG
GTVSLLVMRQEESFLPREMNTEPAMQNTREWKVEDEELVLTPDGTREFLTLEVPLSDSGS
AGLGVSVKGNRSKESHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDA
METLRKSMSTEGNKRGMIQLIVARRINKHLEGESRCSPRGLERTLSPSPDDHERRISHSL
YGIEGLDDNLRPHANTSPHKMNHYQLSPTVNMPQDDTVIIEDDGPHVLPAQLSDQSSSSS
HEDMGFAVETPPPPPWNQELPDSSSSANDEGAFQREGFGRQSMSEKRTKQYGDASQLDII
KTRKSKSMDLVADEINLTHYTENHPGSSSHDVGPSLGLKKSSSLESLQTAVAEVTLNGDM
PFHRPRPRIIRGRGCNESFRAAIDKSYDRPAANEDEEECMDTLEEDNEGSSRSGRDSVST
VADLTPLPVTEQQLINGSQPQNDKKKEKGGKDKKKPEKEKGKTKKGMLKGLGEMFRFGKN
RKDERMDGPKWKAEETHASEEETRRMRQEQERIQAKTREIRQRQARERDYAEIQDFSRST
LTSLPPEEPSYAGIGSLEHSGYHRIHMPPDSPYTHKQIAQNGHPSTSDRLTLSNHDRIQR
LRQEFQQVRQEETEPDDRHRAYSLEQHWSNCSSQTPSGRHSVSVEVQLQRQEARDAFTHA
QRQYSSLPRHPRKTPAPASEREWERMCPGGDGFQAAKDSGRYSSYQGSRSVPRTVPRPGC
RNGLSAPPGAGGSSVGGGYNARVLLEAQELLRQEQRRREQEVKGRGPSMRLDYESQDSKG
RHRQDAPLSPSQVVRLSRIHTPEKTRPFLS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaagaactcgggtcgtggttccgtgcggagatggcaac
attaaagtgcactcgctcgtccagcaggccgcgatgcggtacaggagagcgatcgccaag
gatgaagagtactgggttcaggtgtaccggctggaacacggcgatggaggaattcttgac
ctggatgatgttctgtgtgatgtggccgatgacaaagacagattggtggcagtgtatgat
gaacaggagcctcatgttggaggtgacggcaccagcgcgagctccacaggcacacagtcg
ccggagctcttctctggagagccgtccacctccaccccactgtctgccttccagccgtac
ctgccccacagcgagatagaggtcaccacatccacgcttcgaaccaacatgcctttgcat
gtccgtcgcagtagcgatccggcattgttgaacctgacagcgatgtcattctctgagcct
ggttcacaacctgaagaaccttccagaaaaaatcctacacgctggtctacaaccgccggc
ttcctgaaaccacgtttctcttccggcaccaacagtctggagaggaaggaccgaggtgtc
gacacatatcgtagtcttcctcgtgatgcagggcagtggtccaatcagaaagagtttcag
cgtgagaaggcccgttcctcactcagcgccaatcatcccatggtggaccgctggctggag
cgacaggaacaggatgaggaggaaaatggtaggatagagccagtgggacgtgcggatata
tgtttagagcacatgggagtgagatcgctcaatgatattgtgaaattggtggaagtgtcc
aatgacggaggtccactcggtatccatgttgtgcctttcagcggacgagaccgcaggaca
ttgggtctgctggtgaagcgtttggagcatggagggaaggctgacgtccagggtttgttt
caggaaaatgactgcatcattcagatcaacaatggagatctgcggaatgtccgatttgag
caagctcagaacatgtttcgtcaggcaatgcattctcccgtcatcttgttccatgtggtg
ccgaccaccatgagatccctgtatgagcagatatcccataatgaacacaaccccagagtg
aacattgacctttctggacgtttcagccctgactccctcacaaatgacccggtcggcctg
gatcacgctgctcaccgattggcccagcacatgccacacccaccaaataaccatttggat
accagctctcccatccgtcatcctgttggctcatcagggaaacctccatcaggtcactcc
tcctctccccaaagaggattaagccccgcccccacaactggctttaccaagaaggttggg
cggagacttggaatccagcttagaaaagggcctgaaggtctggggttcagcatcacatca
agggacgtccctcttggaggctccgcccctatttacgtgaagaacattctgccaagagga
gctgccatacaggacgggagactgaaagcaggggatagattgctaaaggtcaatggggtg
gatcttaatgggcgtggtcaggaggaggtggtttctctgctgagggcgacgcccatgggc
gggactgtgagtcttctggtaatgagacaggaagagtcctttctacccagagagatgaac
acagaaccagcaatgcagaacacacgagaatggaaggtagaagatgaggagttggtccta
acacctgacgggacacgtgagttcctgacgttggaagtgcctctgagtgattctggctcg
gcgggtttaggagtcagtgtcaagggtaataggtcaaaggagagccatgctgacctgggc
atctttgtcaagtctattatcaatggaggagcagcatgcaaggatggaaggctgcgagtc
aacgatcagctaatcgcagtcaatggggagtcgttgttagggaagacaaaccaggacgcc
atggaaacactgcgcaagtccatgtcaacggagggcaacaagcgagggatgattcagctg
attgtggcaagacgaatcaacaaacaccttgagggggagagccgatgcagtccccgaggt
ttagagcggaccctgagcccgtctcctgatgaccacgagcgacggatctcacactcgctg
tacggaatcgaggggcttgatgacaaccttaggccacatgccaacacaagtcctcataaa
atgaatcattatcagctctcgccgacggtcaacatgcctcaggatgacacagtcattatt
gaagacgacgggccacatgttctccccgcccagctgtctgaccaatcgtcatccagttct
cacgaagacatgggtttcgctgtggagactccgccaccaccaccctggaaccaagaactt
ccagacagctcttccagtgctaatgatgagggggcttttcagagggaaggctttggcagg
caaagcatgtctgaaaaacgcaccaagcagtatggagacgcaagccaactcgatatcatc
aagacccgcaagtccaagagcatggacctagtggctgatgagattaacctcacacactac
acagaaaaccacccaggctcttcctcacatgatgttggcccgtctctcggcctaaagaag
tccagctctctggaaagtttacagactgccgtcgctgaggtgactctcaacggcgacatg
ccttttcaccggccacgcccacgcatcatacgggggcggggctgcaacgagagcttccga
gccgcaattgacaaatcgtacgacaggccagcagcaaatgaggatgaagaggagtgcatg
gacacattggaggaggacaatgaaggaagctctcgatcagggcgggattccgtttccacg
gtagctgatctcactccgcttcccgtcaccgagcaacagcttatcaatggcagtcagcct
caaaacgacaagaagaaagaaaaaggggggaaggacaaaaagaagccagagaaagagaag
ggtaaaacaaagaaaggaatgctcaagggtcttggagagatgttcaggttcgggaagaac
cgtaaggacgagcgtatggatggtccaaagtggaaagcagaggaaactcatgcatcggag
gaagagacgcgcagaatgagacaagaacaagagaggatccaggctaaaacacgagagatt
cgtcagcgccaggccagagagagagactatgctgagatccaggacttcagtcggtccacc
ctgacctcacttcctcctgaggagccctcgtacgctggcatcggctcgctggaacacagc
gggtaccatcggatccacatgcctccggactcaccatacacacataaacagatcgcccaa
aacggacacccctctacatcagacaggctgacactcagcaaccacgaccgaatccagcgc
ttacgccaggagttccagcaggtcaggcaggaagaaacggagccagatgatcgccaccgt
gcctacagcttggagcagcactggtccaactgcagctcacagacaccatctggccgacac
tccgtgtctgtggaagtgcagttacagagacaggaagccagagatgctttcacacatgct
cagagacagtacagctctctgccacgccaccctcgtaagacacccgccccagcctcagag
agggagtgggagagaatgtgtccaggtggagatggtttccaggcagccaaagacagtggc
cgttactccagctaccagggatctcgttccgtcccgcggaccgttcctcgtcctgggtgc
aggaatggcctctctgctcccccaggagctggtggttcctcggtgggtggcggctacaat
gcacgcgtccttctggaggcccaggagctcctgcgacaagaacagagacgcagggagcag
gaagtgaaaggaagaggcccatcaatgcggttggactacgaatcccaggattccaaaggg
cgccacagacaggacgccccactttccccttcccaggttgtccgactcagccgcatacac
acacctgagaaaacgcgcccatttttgtcataa
DBGET
integrated database retrieval system
