Carassius auratus (goldfish): 113120869
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Entry
113120869 CDS
T07313
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113120869 (taf1b)
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113120869 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
113120869
NCBI-ProteinID:
XP_026146764
Ensembl:
ENSCARG00000007909
UniProt:
A0A6P6RM58
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All DBs
Position
20:10325763..10330705
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AA seq
600 aa
AA seq
DB search
MDEQLTEGYSEPCGQCAAVDWGVSDEGQFFCKSCHNVIEKTREVVDVNTLHSKHSRISQI
TRPKKKRQENEREWLVCEGFQFILKHQAKALVSLGVCIKFETEVLWNFWKRYLQNTQQAF
TRNPVYTPKFTVFMKPQSDSESNAQSEQSYHTEAASEMSEEMSVSGYSSEAQSSVCSGSL
DAVVYQNIKGTKMHNLMTMPRTLALCYLALLWVREAVTLADLLRMVTERRVPYMNIHEAF
PTEMRLFGKDVQFFNVRYLPSYSLVHKEAVTLARILKLPSFPTVSQDCLLHPLPLTVRYL
LEANLPNELHVWVHKVIRQAAMGDSSFLTFDPSKEKPHLLRYDIQAVAVIIVTLKLLFKL
DDHVEWKLSEEAAKKKKKKVFKLKRWFDVVQPVLEQARKREEREEAKRQWGTTKPFITSL
QRKSLVLKKRRVAEHLEQKFQKYSDSAPEQSSSLTNPHASFHFSWGKEEGSDGPSMFNKR
LDCTHKKDGFKYLCNRKYWHPELRLCPRRMCGDHFSEIEPSLPRMYVWVLDLFSFILGVR
RAEVHKEVLNVERRFLKRNHQAKIQWTLTSCKKTKKRSKTATRVVRKKTHVHEENITDGE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaacttaccgagggatacagtgagccctgcggccagtgcgctgctgtagac
tggggagtgtccgatgagggtcagttcttctgcaagagctgccacaatgtgatcgagaaa
acgagggaggtggtggatgtgaacacacttcatagtaaacacagcaggatctcacaaata
acaagacccaaaaagaaaagacaagagaatgagcgagagtggctggtttgtgagggattt
cagttcatcttgaaacaccaggccaaggctttggtcagtctcggtgtctgcatcaagttt
gagacagaagttttgtggaatttctggaagagatacctgcagaacacacagcaagctttc
accagaaatccagtgtacactcctaagtttacagtgttcatgaagccacagagtgattca
gagtctaacgctcaaagtgagcagtcttatcacaccgaagctgcttcagagatgtcagaa
gagatgtcagtctcaggttactccagtgaagcacagtcatcagtatgttcagggtctttg
gatgctgttgtgtaccaaaatataaagggaacaaaaatgcacaatcttatgactatgcca
cggacactggccctgtgctatctggctctgctgtgggttcgagaagccgtcactctggct
gacttattgaggatggtcacagagagacgtgttccttacatgaacattcatgaggcattt
cccacggagatgagactgtttggaaaagatgtccagttcttcaatgttcggtaccttccg
tcctactcgctggttcataaagaagctgtgactctggctcggatcttgaaattaccctct
tttccaacggtttctcaggattgccttctccacccgttaccgctcactgtccgatatctg
ttggaggcaaacctcccaaatgaacttcatgtttgggtccacaaggttattagacaagct
gctatgggggacagctcttttctgacctttgaccccagcaaggagaagcctcatctcttg
cgctatgacattcaagcagtagctgtcatcattgtcaccttgaagctccttttcaagttg
gatgatcatgtggagtggaagttatctgaggaagcagccaagaagaagaaaaagaaagtt
ttcaagttaaaaaggtggtttgatgttgtacaacctgtcttggagcaagccagaaagagg
gaagaacgagaggaagccaaacgacaatggggaaccactaagcctttcattacatctttg
caacgcaagagcttggttctcaaaaaaaggcgcgttgctgaacacttggagcagaaattt
cagaagtatagtgactctgcaccagaacagtcgtcttccttaacaaaccctcatgccagc
tttcacttcagctggggaaaagaggaaggttcggatggacccagtatgtttaacaaacgt
ttggactgtacccataagaaagatgggttcaagtacctctgcaaccgtaaatactggcat
cctgaactgagattatgcccacgcaggatgtgtggggatcatttctcagaaattgagccc
agtttgcccaggatgtatgtgtgggtccttgatctcttctctttcattctgggagtccgt
cgggcagaagtgcacaaagaggtcctcaacgttgaacgtcgttttttgaaaaggaatcat
caggctaagattcaatggactttaacttcctgcaaaaagacgaaaaaaaggtcaaaaacc
gcaacccgtgttgttagaaagaaaacccatgttcatgaagagaatatcactgatggagaa
tga
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