KEGG   Carassius auratus (goldfish): 113120957
Entry
113120957         CDS       T07313                                 
Name
(RefSeq) general transcription factor IIH subunit 5-like
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03022  Basal transcription factors
caua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113120957
  09124 Replication and repair
   03420 Nucleotide excision repair
    113120957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113120957
   03400 DNA repair and recombination proteins [BR:caua03400]
    113120957
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     113120957
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     113120957
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 113120957
NCBI-ProteinID: XP_026146899
UniProt: A0A6P6RNK1
LinkDB
Position
20:12297768..12300690
AA seq 71 aa
MVNVLKGVLVECDPAMKQFLLYLDETSALGKKFIIQDLDDTHVFILAEVVQILQERVGEL
MDQNSFPITQK
NT seq 216 nt   +upstreamnt  +downstreamnt
atggttaatgtcttgaaaggagttctcgttgaatgtgacccagctatgaagcaatttctt
ctatatctggatgagacgtcagcattggggaagaaatttatcatccaggatttggacgac
acgcatgttttcatcctggctgaagttgtgcagattctccaggagcgagtaggagaactg
atggaccagaattcattccccatcacccagaaataa

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