Carassius auratus (goldfish): 113120958 Help Entry 113120958         CDS       T07313                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism caua  Carassius auratus (goldfish) Pathway caua03030   DNA replication caua03410   Base excision repair caua03420   Nucleotide excision repair caua03430   Mismatch repair Brite KEGG Orthology (KO) [BR:caua00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113120958    03410 Base excision repair     113120958    03420 Nucleotide excision repair     113120958    03430 Mismatch repair     113120958  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:caua03032]     113120958    03400 DNA repair and recombination proteins [BR:caua03400]     113120958 Enzymes [BR:caua01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113120958     6.5.1.6  DNA ligase (ATP or NAD+)      113120958     6.5.1.7  DNA ligase (ATP, ADP or GTP)      113120958 DNA replication proteins [BR:caua03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     113120958  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      113120958 DNA repair and recombination proteins [BR:caua03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      113120958    NER (nucleotide excision repair)     Other NER factors      113120958    MMR (mismatch excision repair)     Other MMR factors      113120958 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  113120958 NCBI-ProteinID:  XP_026146904 Ensembl:  ENSCARG00000008435 UniProt:  A0A6P6RMJ7 LinkDB All DBs Position 2:22799183..22815674 Genome browser AA seq 977 aa AA seqDB search MQRSIAAFFQPMKSKEKSDGQVKAKTEPVKSPLKIQNGVQESDSPVKKVHKRSRAIIESD DEDQPIVKEQVPKDSEVQTAKPEKAVSTVSPKTPITPTTPVTSGTSVAVVTPASSGTPAT PTSTSPSGIPKRKTARKQFPKRKLESRSDEEGTKEEEKDLDRAQESKRARVESSPGNTDN EMMEVEEKSIDGKIVVEEQKEEDEAKTSVVEDEANNEMNGKDKSDIKQKKKMHGENGKKE KIEDKKDKEDSSPERVVKKEKSTEEEGGSAKKKPISSFFAPRKAAVKLEKEERNEGDKKK NGEISDAAGQKEKKSEKGMDSGVQSHYDPSRAHYNPVDHACWRKGQKVPYLAVARTFEKI EEDSGRLKNIETLSNFLRSVILLSPDDLLCCVYLCLNQLGPAYQGLELGVGETVLMKAVA QATGRQLDKIKAEAQEKGDLGLVAESSRSNQRMMFAPANLTAGGVFNKLKEIANMSGNSA MNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAEQSILAALSQAVCLSPPGQGFPPA VLDAGKGMSAENKKVWLEEKALILKQTYCEMPNYDAIIPVLLKEGIDALPNHCKLTPGVP LRPMLAHPTKGVGEVMKRFDEASFTCEYKYDGERAQIHILENGEVRIFSRNQEDNTSKYP DIISRIPQMKKENVRSCVLDSEAVAWDREKKQIQPFQVLTTRKRKDVDASEIKVQVCVYA FDLLYLNGEPLVREPLSKRRALLRESFEEKEGEFVFARSLDADNTEAIAEFLEQSVRDSC EGLMVKTLEKNATYEIAKRSHNWLKLKKDYLEGVGDTVDLCVIGAYLGKGKRAGNYGGFL LACYDEENEEFQSVCKIGTGFKDEDLEQHYNFLKEHILLKPRPYYRVDQSAEPDVWLEAV QVWEVKCADLSLSPVYKAAMGLVDPEKGISLRFPRYLRIRDDKKPEDATTGSQIADLYKK QQQIQNQGEKQDLEDYY NT seq 2934 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagcatagcagcattctttcagccaatgaaaagcaaggaaaagagtgatgga caggtcaaagcaaaaactgaacctgtaaaaagtcctctgaaaattcagaatggcgtgcag gaaagtgattcacccgtaaagaaagtgcataaacgcagtcgagcgatcatagaaagcgat gatgaagatcagccaatagtaaaagagcaggtgccaaaagacagtgaagttcaaacagca aagccagagaaggctgtttccactgtatctccaaaaactcccataaccccaacgactcct gtcacgtcgggtacctctgttgccgtggtaacccctgcttcctcaggtactccagcaact ccgacatcgacatccccgtcaggcattcccaaacgcaagactgctcgcaagcaattcccc aagaggaagctggaaagcagaagtgatgaagaggggacaaaagaggaggagaaggatctc gatagagcgcaggagagtaagagagcgagagtggagtcttcacctggaaatacagacaat gagatgatggaggtggaagagaagagcattgatggaaagattgttgtggaggaacagaaa gaggaggatgaagcaaaaacatctgtagttgaggatgaggcaaacaatgagatgaacgga aaggacaaaagtgacataaaacagaagaaaaagatgcatggagaaaatgggaagaaggaa aaaatagaggacaagaaagacaaggaagatagcagtcctgaaagagtggttaaaaaagaa aaaagcacagaagaggaagggggatcagccaaaaagaaacccatcagcagcttttttgct cccagaaaggccgctgtaaaactggaaaaagaggagcgaaatgagggagataaaaagaag aatggagagatctctgatgctgctggacagaaagagaagaaaagtgaaaaggggatggat tctggagtccagagccattatgatccctccagagcacattacaatccagtcgaccacgcc tgctggaggaagggccaaaaagtgccatatttggctgttgctcgcacctttgagaagatt gaagaggattcgggcaggctgaagaacattgaaacgctttccaactttctgcgatctgta attcttctctctcccgatgacctgctatgctgtgtgtacctgtgtctgaatcagctcggc cctgcatatcagggtctggagctgggtgttggggagaccgtcctgatgaaagccgtcgct caagcaactgggcgacaactggacaaaatcaaggcggaggctcaggagaaaggtgacctg ggattggttgctgaaagttcccgtagcaaccagcgaatgatgtttgcaccggccaatctg acagcagggggcgttttcaacaaactgaaagagatcgctaacatgagtggaaactctgca atgaataagaagattgacattattaaaggtctatttgtggcatgtcggttttctgaggct cgatacattgtccggtcactggctgggaagctgcggatcggattggctgagcagagcatt ctcgcggctctcagtcaggctgtgtgtctgtcgccgccgggccaagggttcccaccagct gtgctggatgcagggaaaggaatgagtgcagaaaacaagaaagtgtggctggaggagaaa gctctgatcctgaaacagacatactgtgagatgccaaattatgatgctatcattcctgta ttgctgaaggagggcatagatgcactgcccaatcactgcaagctcaccccaggtgttccc ctgcggcccatgttggctcacccgactaaaggggtcggtgaggtaatgaaacgttttgat gaggcatctttcacctgcgagtataaatacgatggagagagagcccagatccatattctt gagaatggagaggtgcgcatttttagccgaaaccaagaggacaacacaagcaaataccct gatattatttcacgaatcccacagatgaagaaagagaacgtacggtcctgtgttctggat tcagaggcggtggcctgggacagagaaaagaaacagatccagccatttcaggtccttacc actaggaagaggaaggatgtggatgcatctgagatcaaggttcaggtgtgtgtgtatgcc tttgatctgctgtacctgaacggagagcctctggtgcgagagcctctaagtaaacgcagg gctctgttacgggagagttttgaggaaaaagaaggggagtttgtttttgctcgatctctg gacgctgacaacaccgaggccattgctgagttcctggagcagtctgtacgagattcttgt gagggcctaatggtgaagacattggaaaaaaatgcaacttatgagattgccaaacgctcc cacaactggctcaagctgaagaaggactatctggagggtgttggagacacggtggatctg tgtgtgattggtgcttatctggggaaggggaagagagcaggcaactatggaggatttcta ctggcctgctacgatgaggagaacgaggagttccagtctgtctgcaagattggaacaggc ttcaaagatgaagatctggagcaacattacaatttcttaaaggagcacattttacttaaa ccacgcccatattaccgtgtggaccaatcagcagagccggatgtctggctggaggcggta caagtgtgggaggtgaaatgcgctgacctttcattgtctccagtctacaaggcagcaatg ggattggtggacccagagaaaggcatttcactccgtttcccacggtacctcaggattcga gatgacaaaaaaccagaggatgccaccacagggtcacagattgcagatctatacaagaag cagcagcagattcaaaatcagggcgaaaaacaagatctggaagactactattga

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