Carassius auratus (goldfish): 113120986
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Entry
113120986 CDS
T07313
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
caua04144
Endocytosis
caua04510
Focal adhesion
caua04540
Gap junction
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113120986
04020 Calcium signaling pathway
113120986
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113120986
09144 Cellular community - eukaryotes
04510 Focal adhesion
113120986
04540 Gap junction
113120986
09142 Cell motility
04810 Regulation of actin cytoskeleton
113120986
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
caua01001
]
113120986
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
caua04090
]
113120986
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113120986
Protein kinases [BR:
caua01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113120986
CD molecules [BR:
caua04090
]
Proteins
113120986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Ig_5
Kinase-like
Motif
Other DBs
NCBI-GeneID:
113120986
NCBI-ProteinID:
XP_026146946
Ensembl:
ENSCARG00000045218
UniProt:
A0A6P6RN46
LinkDB
All DBs
Position
20:12897731..12919858
Genome browser
AA seq
1461 aa
AA seq
DB search
MGFVETHLVFGIVLLGIFLDVSKPFPVINSDQKEFILTPHSEFTITCSGERTVTWVEPLP
PNSEVQSGFNHSTLMIADADASNTGYYTCSYEDQPEKDTDIYIFVQDPEVPFVSESAVET
DEMGTTIPCRATNPHSQVILRNLQSGVEVSVLYDHKLGFFGVITPGHYVCETSVNGKAVQ
SIVYNVTNDMEDDDDDGDVDEEKSFYIKLSASMEDVKEGDAVNLTCETSPGKAFHQQWLH
PQKQAGNAVSMKLTFPDKVQYILNIPKASVADTGLYECAVTNQLTDQTKSLSLGITVHES
SFVEVISNGIGPVEVVSLLEEKEFTIYIDADPEPKVRWFKDDLPLDDSYISTKTTHLQGL
RYENILVLRHPIEEDSGVYEIVASTGSMTSRFSFKLLVEAMYPELLQSVLAPVMWPQRDS
MEVSLHSTFRLTCRGQAELSWHGPVYLHDQFDSEKKGLFISTVTVGNATAAHTGKYICYY
DSSNNTEESSIYIYVPDPETPFVQSMIPFENHVLTSHDEMEIPCRVTDPSAEVSLIHIES
NQVLPSVYDSTRGFTGLFSSGTYVCRALTNGQTHDSIEYIVHGWTGGSDVEVELRAEKKA
LLVGETITVDCVARNSEILEDHWKYPGKMAGRGVKTVKENKRDLEIHYTLTVTNASLKDS
GVYACSITDVKSNESQTKQLTITVYGQEFVHINPMTGPVETTRLDEVREFRVAIQSFPAP
KVTWLKDGSVLGDVAAEIATSLLKIDETSYQGMLTLIRAKAEDSGNYTIRAETGSQTASN
SFYLQVKVPPVIVDLVDIHHGSAAGQEVVCTAAGSPAPDVDFYICKNIKHCANDSSQWMP
LPINSTGITVKLQMEVDNNIESHIIFHHLESTIAVRCLARNDMGAVSREVKLVSNGPHSE
LTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDS
RWEFSRDSLVLGRVLGSGAFGKVVEGTAYGLSHSQPVMKVAVKMLKPTARSSEKQALMSE
LKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKGKKE
LDIFGINPADESSRSYVILSFEGKGDYMDMKQADTVQYVPMLEMSEASKYSPIQRSDYDH
PPSQRQFNESEVENLLSDDTTEGLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL
SQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLW
EIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHSSSDVYELMMKCWNSEPEKRPSFHSL
SETVASLLPSGYKRCYERVNRDFLKSDHPAVTRVQCVDNDDAYMGVLYKNQGKMKDRESG
FDEQRLSSDSGYIIPLPDLDPLSHEDYSKRNRHSSQTSEESAIETGSSSSMTKREGETLE
DITLLDEMCLDSGDLVEDSFL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtggagacacatctcgtttttgggattgtcttactagggatatttttagat
gtttcaaaaccgtttccagtaattaattcagatcaaaaggaatttattctcacacctcat
tctgagttcaccatcacttgctccggagagaggacagtgacatgggtcgagcctttacca
cccaacagtgaagtgcagtctggatttaatcacagtactttgatgatcgctgatgctgat
gcctctaacacaggatactacacctgcagttatgaggatcaacctgaaaaagacactgat
atctacatttttgttcaagatcctgaggttccattcgtgtctgaatctgctgttgagaca
gatgagatgggcacaactatcccctgccgcgctacaaacccacattctcaagtgattctc
cgaaacctgcagagtggagttgaagtttctgtgctttacgaccacaaactcggctttttt
ggtgtaataacacctggtcactatgtttgcgagacgagtgtgaatggcaaagcggtgcag
agcatcgtttataacgtgacaaatgacatggaagatgatgatgatgatggtgatgttgat
gaagagaagagcttctacataaagctgagtgccagtatggaggatgtgaaagagggggat
gctgtcaatctgacctgtgagacgtctcctgggaaggctttccaccagcagtggctgcat
ccccaaaaacaggccggaaatgctgtttcaatgaagttaactttcccggacaaggttcag
tacatcctcaacatcccgaaagcctctgtggcggacactggactctatgagtgtgctgtt
accaaccagctcactgatcaaaccaagtctctcagcctgggaatcacagtccacgagagc
tcttttgtggaagtaatatctaatggcattgggccagtggaggttgtgtcgcttctggag
gaaaaagagttcactatttacattgatgctgaccctgagccaaaggtcaggtggtttaaa
gatgaccttccgctggatgacagctacatctccaccaagaccactcatctacaaggcctc
aggtatgagaatattctggttctccgtcaccccatagaggaagacagtggcgtctatgag
attgttgcatccactggttccatgacttcaagattttctttcaaactgcttgttgaagct
atgtacccagagctgctacagtcagtgctggctcctgtcatgtggccccagagggacagc
atggaggtgtctctccactccactttccgactcacgtgtcgcggtcaggccgagctctcc
tggcacggccctgtttatctccacgatcagttcgactctgaaaaaaaaggactcttcatc
tctactgtgactgttggcaatgcgacggccgcccatacaggaaaatacatctgctactat
gactccagcaataacactgaggagagctccatctatatttatgtgccagatccagaaacg
ccatttgtgcagtccatgatcccttttgaaaaccatgtgctgacgagtcatgatgaaatg
gagattccctgccgtgtgacggaccccagtgccgaagtctccctgattcacatcgagtcc
aatcaggttctgcccagcgtctatgacagcacgagaggattcactggcctcttcagctct
gggacgtatgtctgcagggccctcactaacggacagacgcatgacagcatagagtacatt
gttcatggctggacaggagggtctgatgtggaagtcgagctgcgagcagagaagaaagct
cttctggtgggtgagaccatcaccgttgactgtgtagccagaaacagtgagatactggag
gaccactggaaataccctgggaaaatggcgggtcgaggagtaaagaccgtaaaggagaat
aagcgcgatcttgagatccattatactctgacagtgactaatgcctcattaaaagacagc
ggcgtctatgcttgctccatcactgatgttaagagcaatgagagccaaaccaaacaactc
actattacagtctatggtcaagagtttgtgcacataaatccaatgactggtccagtggag
actactaggctggacgaggtgcgagagttcagggtggccatacagtctttccctgccccc
aaagtcacatggttaaaggacggatcggtcttgggagatgttgctgcagagatcgccacc
agcctcctaaaaatcgatgagaccagttaccaaggcatgttgaccctgatcagggctaaa
gcagaggacagtgggaactataccatcagggcagagacaggcagccagacggccagcaac
agtttctaccttcaggttaaagttccccccgtgattgtggacctggtggatatccaccac
ggctctgctgcaggtcaggaagtggtgtgtactgctgctggctcccccgcccctgatgtg
gacttttatatctgtaaaaacattaaacactgtgccaacgattcctcccagtggatgcca
cttccgatcaactctacgggcatcacagtcaaactgcaaatggaagtggacaacaacatt
gagagtcacatcatcttccaccatcttgagagcacaattgctgtgcgctgtctggccagg
aatgacatgggcgctgtgtcacgagaggttaaactcgtgtcaaatggtccgcactcggag
ctgactgtggctgctgctgttctggtgctgctggtcattgtcatcatctcactcattgtg
ctggtcattatctggaaacagaaaccacgttatgagatcagatggcgtgtgattgaatcg
gtcagtccggacggtcacgagtacatctatgtggaccccatgcagcttccatatgactct
cgctgggagttctctcgggattcacttgtactgggtcgtgtcctgggctcaggtgcattt
gggaaagtggtggaaggcactgcttatggacttagtcattctcaacctgtgatgaaagtg
gcagtgaaaatgcttaaaccgacagcgcgctccagtgagaaacaggctttgatgtcagag
ctgaaaattatgacacacctgggccctcatctaaacattgtcaaccttctgggagcgtgc
accaaatcaggaccaatctacattatcacggagtattgtttctatggagacctggtgaac
tacttgcataagaacagagatgggtttctcagccgccacacagaaaagggaaagaaagag
ctagacatctttggcatcaacccagctgatgagagtagcaggagctatgtcatcctgtct
tttgaggggaaaggtgattatatggacatgaagcaggcagacaccgtgcagtacgtccca
atgctggaaatgagtgaagcctcaaaatactcccccatccagagatcagactacgaccac
cctccctctcaaagacaattcaacgagagtgaagttgagaaccttctctcagatgacacc
actgaaggcctgacgacaatggacctcctcagtttcacctatcaggtggcacgtgggatg
gagttcttggcctctaagaactgtgtacacagagacttggctgcacgtaatgtcctgctg
tctcaaggcaagatagtgaagatctgtgactttggactggccagagacatcatgcatgat
aacaactacgtctccaaaggaagtactttccttccagtaaaatggatggcccctgagagt
atctttgataacttatacactacactaagtgacgtctggtcttatggcatcttattatgg
gagatcttctctcttggagggactccttatccaggtatggttgtggattccagcttctac
aacaagatcaagagtggataccgaatggcgaaacctgaacactcgtccagtgatgtctat
gaacttatgatgaagtgttggaacagtgaaccagagaagagaccgtctttccacagcctg
agtgaaacggtggcctctctgctgccttcaggatataagagatgctacgaacgcgtgaat
cgtgacttcctgaagagcgatcaccccgctgtgactcgggtgcagtgcgttgacaatgat
gatgcgtacatgggtgtgctctacaagaaccagggcaaaatgaaggaccgcgagagcggc
tttgatgaacagagactcagctctgacagcggatacatcattcctctgccggacctcgac
ccgctgtcacatgaagactacagcaagaggaaccgccacagctctcagacgtcggaggaa
agcgcaatagagacaggctccagcagctccatgacgaagcgtgagggagagaccctggag
gacatcaccttgctggacgagatgtgcttggactcaggagacctggtggaggacagtttc
ctgtga
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integrated database retrieval system
