Carassius auratus (goldfish): 113121007
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Entry
113121007 CDS
T07313
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113121007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113121007
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113121007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
DUF7268
Motif
Other DBs
NCBI-GeneID:
113121007
NCBI-ProteinID:
XP_026146984
Ensembl:
ENSCARG00000053102
UniProt:
A0A6P6RMT3
LinkDB
All DBs
Position
20
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AA seq
503 aa
AA seq
DB search
MSTREVEKTADDETDWLYGDDNFDEDETTEKEVFSALIGDVEDMNGLNYQQSESDSDDDV
CVTIGDIKTGGSQDSSFGSSSIGLNINTSVSGSKSTGLGLDAEGNVLQVDVESFDEKPWR
KPGADLSDYFNYGFNEDTWKTYCDKQRRLRISLEILSLGSSSKIMVHQNSSSDLSELSSR
KSSGSINVIGGQAGTISRVEGRRRHSADENNIQVVSEQSSDTELSSPKLLPFFPPNIPPP
PFPPPPNIPPPPAFPLPPGAPPHMLPPLDRLVSYRNWRERQRRSSRQRKQEHSKSLYRQK
KEKKKDIERKGERRSSGRLAGGFDRRSATSYPFPAGVYSPAVGMASWSGVIDSGKAWENY
NRQNKERVREKTRERGHKKEQERERERERNRETDREHSPSSQDHRSEEERVSRHRDHSHY
GSERYRKSSGREGMRDRHRERQHRDRSEQHRSSHSGSGRRHHDSDDADSHRRHRHKRSRH
NRGSLEPSEECSVDQENQSEATE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgagagaagtagagaaaacagctgatgacgagacggactggctttatggagat
gacaattttgatgaagatgagacaacagaaaaggaagtcttcagtgctctgattggtgat
gtggaagacatgaatggactcaattaccagcaaagtgaatcagacagtgatgatgatgtc
tgtgtgaccatcggtgacattaaaacaggcggatctcaggactcgtcatttggttccagt
tccatcggtctgaacataaacacctctgtatcaggctccaagtccacagggctgggtctg
gatgctgaaggcaatgtcttgcaggtggatgtggagtcatttgatgagaagccatggagg
aagccaggtgcggatctgtctgactactttaactatggttttaatgaggacacctggaag
acatactgcgacaaacagagacgactgcgcattagcctagagatcctgagcctggggtca
tcaagcaaaataatggttcatcagaattctagtagtgatctgtcagaactctcatccagg
aagtcgagtggttcgatcaatgttatcggaggacaagcagggaccatcagtcgagtggaa
ggcagaagacgtcacagcgctgatgaaaataacatccaggtggtgtcagagcagtcctca
gacacagagctatcttccccgaagctgttgcccttctttcctcccaatatcccacctcca
cctttccctcctcctcccaatataccaccaccacccgcattcccattgcctcctggtgcc
cctcctcatatgctaccaccattagataggttggtctcgtatagaaactggagagagaga
cagaggagatctagcagacagagaaagcaagaacatagcaagtcactatacaggcaaaag
aaggagaaaaagaaagatatagaaagaaagggagagagaaggagcagtggacgtttggcg
ggaggctttgatcgacggtcggctacatcttaccctttccctgcaggtgtgtattcacct
gcagtgggcatggcttcgtggtcaggtgtgattgacagtggcaaagcatgggaaaactac
aaccgccaaaacaaagaaagggtgagagagaaaaccagagaaagaggacacaagaaagag
caagagcgggagagagagagagagcgaaacagagaaacagatagagaacacagtccgtcc
tcacaagatcacagaagtgaggaggagcgtgtgtctcgacacagggatcacagtcattac
ggaagtgagaggtacaggaaaagctcaggaagagaaggaatgagagacagacatcgagaa
agacaacacagagaccggagtgaacaacacagatcctcacacagtggcagcggtaggcgg
catcatgatagtgatgacgcagatagccacaggagacacaggcacaaacgctctagacac
aacagaggaagccttgagcccagcgaggagtgcagtgtggaccaggagaaccagtcagag
gccacagaataa
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