Carassius auratus (goldfish): 113121053
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Entry
113121053 CDS
T07313
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113121053
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
113121053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
113121053
NCBI-ProteinID:
XP_026147066
Ensembl:
ENSCARG00000011938
UniProt:
A0A6P6RNF5
LinkDB
All DBs
Position
2:22989671..23006486
Genome browser
AA seq
1216 aa
AA seq
DB search
MADGPRCQRRKQTQPRRNNVRSFSSVPEATSDSDDEDKLHIAEEDSIADDPDLKSSVFQL
EAAQQLSETCTQDDGSLGPDTLIEEIRVKEECVTDEEEGADDEVDDEEKQTETEHVYSDV
PEEHQRTPERGVHDENGTPDAFPQLHTCPHCSRGYKRHTSLKEHIKLRHEKSEDNYCCSL
CSYTFTYRTQLVRHMTAHRHVREQRTITQSGGNRKFKCTECSKAFKYKHHLKEHLRIHSG
EKPYECSNCQKRFSHSGSYSSHISSKKCASVTPAVNGLPRTPGVKTALTVSRPTHILLRE
KTDITNKPLQEQLPLKQIKQEPVEQQPKPAPATPIIAAATTNGVVAPQGVVQTLVLPTVG
LVQPISINLSDLQNALNAAMEGNVIRQVLTSTNANGANAKIVGQVPAQAQAVVLQPQQAQ
PQVISAISLPVLGQDGNAKIIINYNPQLDSQLKAVKVNTTQPTATQTSTAQAKSTVSDIV
QPNVVQFQSVQSNSTETQTSCPPKPTHVNIIKPVQAGNLSKPASIIKITPAQAARLVQAR
AAQPKLTQQTLLLVRRADGTQSLVVRQIPVTNSNTKSTETKSSPEKTTNTPPAEEEETTE
NTGSLEDKCEKQNLTAPPEIKIKTEPASPSKIEPEMQSEDDKEMQTDENQEGGKQTTVTT
EPVVHSGTVHCGVTCGDNFHNYATCLLCDSSLGKRKPSDCEDSDAKGSPTTISLSSLLDK
DKSGAAERLLPLLKAYSQNPEPSEEQLSQVAKTVRLPLEAVIKWYQKMRSKRILLQAAGN
LKENNQEKTTPSAVPEGMSPTQDTCTPTQPLDGTSLDSQNGSAASPASPPASVSPDDLVI
VKTEDMEEELQCEPLDLSLPKSSSAQASTTTKLPVSTQKEPLNLTCLKKQPLPGNTIYVT
QAGTGPLKIMTTPLPTLVAIAEPGGVSCIGTAISGNKRTILIPQLTYTYTTNPSVKTPDN
SLTDTKGTVILNSCTKVVDTASDCVSEDQNDEDSPLMKKKRKTVGGQYACDLCDKVFQKS
SSLLRHKYEHTGKRPHECAICNKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYS
QHMNHRYSYCKRDTHELPEQVSTSTPPSQLDSDERESDAEEEEDLTALDMSDIRVVRVGE
EYEDEEESCGEEEQDRGREEQETEEGGMVMEVDLGDTDTLEEETVETEDAMETEESKEEE
AVLTNNEDNTEMATED
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaaacagacacagccacgacgcaacaacgtg
aggagttttagcagtgtgccagaggcaacttcagattcagatgatgaagacaaactgcac
attgcagaggaggacagcattgctgacgatcccgacctaaagtcctcagtattccagctc
gaagcagcacagcagctctctgaaacatgcacacaggacgatggcagcctggggccagat
actttaatagaagaaataagggtcaaagaggagtgtgtcactgatgaggaagagggtgct
gatgatgaagtggacgatgaggaaaagcagacggaaacagagcacgtttactcagacgtc
ccagaggagcatcagagaacgccagagcgaggggtccacgatgagaacggtactcctgat
gcattcccgcagctgcacacctgtccgcactgttcccgcggttacaagcgtcacacatcg
ctcaaggagcacattaaactacgccatgagaagagtgaggacaactactgctgctccctc
tgtagctacaccttcacctaccgcacgcagctcgtccgtcacatgaccgcacacagacac
gtccgggagcagcggactattactcagtcaggcggaaacagaaagttcaagtgtacagaa
tgctccaaggccttcaaatacaaacatcacctaaaggagcacctacgcatacacagcggt
gagaagccatatgagtgctctaactgtcagaagcgtttctcacactcggggtcctacagc
tctcacatcagcagtaagaagtgtgcgagtgtgacccctgcggtcaacggccttcctcgc
acacctggagtgaaaacggctcttactgtttctcgccccacacacatccttctaagggag
aagacggacattaccaacaagcctctacaagagcagctccccctgaaacagatcaaacag
gagcctgtcgagcagcaacccaaacctgcgccagcaacacccattatagccgccgccact
accaatggagtcgtggctccacaaggcgttgtccagacactggtcctgcccactgttggg
cttgtccagccaatcagcatcaacctaagcgacttacaaaatgcgcttaatgcagcaatg
gaagggaatgttatcaggcaggtgttgactagcaccaatgcaaacggagcaaacgctaaa
atcgtaggtcaagtgccggcgcaggcgcaagctgtcgtgttacagccacagcaggcgcag
ccgcaggtgatctctgccatctctctgccggttttgggacaagacggaaatgccaaaatt
atcatcaactacaacccccagctggattcacaactcaaggcagtaaaagtgaacacaaca
cagcccacagcaacacaaaccagtacggcgcaggcaaaatctacagtgtccgacatcgta
cagccaaatgtggtgcagtttcagtcggtgcagtccaactcgactgaaacccaaacatca
tgtcccccgaaacctacacatgtaaacatcattaaaccagtccaagctggaaacctcagc
aaaccggcgtctatcatcaagataacgcctgcacaggctgccaggctggttcaagctcgg
gcggcacaaccaaagctcacccagcaaactttactgctggtgagaagggcagatgggacg
cagagcctcgtggttcgacagatacctgtcaccaattccaacacgaagagcactgagact
aaatcatccccggagaagactacaaacactcctccagcggaagaggaggagacaactgaa
aatacaggttcgctggaggataaatgtgaaaaacaaaacctgacagcaccaccagaaatc
aaaatcaaaaccgaaccggcctctccgtccaagatcgagcccgaaatgcagagtgaggat
gacaaagagatgcagacagatgaaaatcaagaaggagggaagcaaacaacagtgacaact
gagccggtcgtacactctggaacagttcactgtggagtcacctgtggagataacttccac
aattacgcaacgtgtctgctttgcgacagctccctgggcaagcgtaagccttcggactgt
gaagacagtgatgccaaagggtcgcccacaactatatctctctcctctctactggataag
gataagagtggagcggcagaacgtctccttcctcttctgaaggcctacagtcagaaccca
gagcctagcgaggagcagctgtctcaggtggccaagacagtccggttacctctagaggcg
gtcatcaagtggtaccagaagatgcgctccaagaggatactgctccaggctgcaggcaac
ctgaaagaaaacaaccaagagaaaactacaccatctgctgtgcctgaaggaatgagccct
actcaagacacttgcactcccactcaaccccttgatggcacttcgttggactcccaaaat
ggaagcgccgcttcacccgcctcccctccagccagtgtctcccccgatgacctcgtcatt
gtaaagaccgaagacatggaggaggagctgcagtgtgaaccgctggatctctcgcttcca
aagtccagctccgctcaagccagcaccacaactaagctgccggtctccacccaaaaggaa
ccgcttaacctcacctgcctcaagaagcaaccgctgccaggcaacaccatctatgtgacg
caggccggcacgggtccactaaaaattatgacaaccccattgccaacactggttgctata
gcagagccaggcggtgtttcctgcattggcacggcaatatccggtaacaaacgaaccatc
ctcatccctcagctcacctacacctacaccaccaaccccagcgtcaaaacacctgacaac
tccctgacagacacaaaggggaccgtgatcctcaacagctgtacgaaggtggtggacacc
gcttcggactgcgtgtcagaagaccagaatgatgaagactcacctctaatgaagaagaag
aggaagaccgtcggtggccagtacgcctgcgatctgtgtgacaaagtcttccagaagagc
agctcactgctgcgacacaagtatgaacacacaggtaagcggcctcacgagtgcgccatc
tgtaataaagctttcaaacacaagcaccacctgatcgagcactcgcgactacactccgga
gagaagccctaccagtgtgacaagtgcgggaagcgcttctctcactcgggctcttattct
cagcacatgaaccacagatactcctactgcaagagagacactcatgagctgccggagcag
gtcagcacctccactcctccctctcagctcgactcggacgagagagagagcgacgcagag
gaggaagaggatttgaccgctctggacatgagcgatatcagagtggtgcgagtgggagag
gaatatgaggatgaggaggagagctgtggagaggaagagcaggaccgaggacgtgaggag
caagagacagaggaaggaggaatggtgatggaggtggatctcggagatactgacactttg
gaggaagaaaccgttgaaacggaagatgctatggagacggaggagtcaaaggaagaggaa
gcagttctcacgaataatgaagataacaccgagatggcaaccgaggactga
DBGET
integrated database retrieval system
