Carassius auratus (goldfish): 113121131
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Entry
113121131 CDS
T07313
Name
(RefSeq) integrin beta-1-A-like isoform X1
KO
K05719
integrin beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03271
Virion - Rotavirus
caua04145
Phagosome
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04514
Cell adhesion molecules
caua04530
Tight junction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
caua05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113121131
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113121131
04514 Cell adhesion molecules
113121131
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113121131
09144 Cellular community - eukaryotes
04510 Focal adhesion
113121131
04530 Tight junction
113121131
09142 Cell motility
04820 Cytoskeleton in muscle cells
113121131
04810 Regulation of actin cytoskeleton
113121131
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113121131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113121131
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113121131
04515 Cell adhesion molecules [BR:
caua04515
]
113121131
04090 CD molecules [BR:
caua04090
]
113121131
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113121131
Exosome [BR:
caua04147
]
Exosomal proteins
Proteins found in most exosomes
113121131
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin beta subunits
113121131
CD molecules [BR:
caua04090
]
Proteins
113121131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
113121131
NCBI-ProteinID:
XP_026147163
Ensembl:
ENSCARG00000012932
UniProt:
A0A6P6RQ85
LinkDB
All DBs
Position
2:complement(23072401..23110814)
Genome browser
AA seq
795 aa
AA seq
DB search
MDVKLLLFSLLLGLSRAQQDGNECTKASAQSCGECIQAGEKCGWCIDKDFLKQGEQKSTR
CDEIEALIKKGCSETNIQNPRGTVSVNKNKPLSDRTKDGVKLKPDEITQIQPQKLTLDLR
SGEAQKFNLTFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTALMSEMQKITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCSSDQNCTSPFSYKNVLSLTSEGYQFNELVSKQQISGN
LDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLQ
DNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFHPVYQELKNLIPKSAVGTLSSDS
GNVINLIIDAYKSLSSEIILENNRLPEGVSISYVSHCKNGVSQEGENGRKCSNISIGDQV
TFEVSITAKGCPSNDKPETIKIKPQGFTEEVEIVLNFICECACHKGGIPNSSECSGGNGT
LECGACRCNEGRIGRLCECSKDEVRTDDLDANCRMDNGTDICSNNGDCVCGTCECKKRDN
PEERYSGKFCECDNFSCDRSNNKLCGGHGRCECRKCMCDANYTGSACDCSLDTSTCLASN
KQICNGRGTCDCGQCKCTDLKFQGPTCEICPTCPGVCTEHKDCVQCRAFGTGEKKDTCNE
QCNNFILVKKKKKEELPQPNDQPYINHCKERDANDCWFFFTYATKNDSTVEVHVVEELEC
PSAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKSNARWDTGDNPIY
KSAVTTVVNPKYEGK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctgctcctgttttcacttcttcttggactcagtagggcacaacaagat
ggtaacgagtgcaccaaggcctcagcccagtcctgtggagaatgcattcaggccggagaa
aagtgtggctggtgtatagacaaggactttctgaaacagggtgagcagaagtccacacgc
tgtgatgagattgaagctctgattaagaagggctgctctgaaaccaacatacaaaatcct
cgggggactgttagtgtcaacaagaacaaacctttatccgaccgcacgaaggatggagta
aaactgaagccggacgagatcacccagattcaaccacagaaactcaccctagacctcaga
tcaggtgaagctcagaagtttaatctgacattcaagagggctgaggattatcctatagat
ctctactacctgatggacctcagctactcaatgaaagatgatttagagaacgtcaaaaac
ctgggaaccgcccttatgagtgaaatgcaaaagatcacatcagacttcaggattggcttt
ggctcctttgtggagaaaactgtcatgccgtacatcagcacaacaccagccaaactgcta
aacccctgctcatcagaccagaactgcaccagcccgttcagctataaaaatgtgctgagt
ttgacttcagaaggatatcagtttaatgagcttgttagcaagcagcagatctcgggaaat
ctggactcaccagagggagggttcgatgccatcatgcaagtggctgtctgtgcgaatcag
atcggctggaggaatgttacccgtctgcttgtgttttccacggatgctggattccacttc
gctggagacggaaaactgggtggcatcgtgcttcctaatgatgggaaatgccatctgcaa
gataacatgtacaccatgagccattactacgactatccttcgattgcacaccttgttcaa
aaattaagtgaaaacaacattcagaccatttttgcagtaactgaagagttccatccagtt
taccaggagctgaaaaacctcattccaaagtcagctgtgggaacgctatcctcggactcg
ggcaatgtgataaacctgattattgatgcatataaatctctgtcctctgagatcattctg
gagaacaataggctccctgaaggtgtgtccatctcctacgtctcccactgcaagaatgga
gtgagccaagaaggagaaaatggacgaaagtgctccaacatctccattggggatcaggtg
acgtttgaagtatcgatcacggctaaaggctgtccatctaatgacaaaccagagactata
aagatcaagccgcagggcttcacggaggaggtggagatcgtcctcaacttcatctgtgaa
tgtgcgtgtcataaagggggaatcccgaacagttcggagtgtagcggcggcaacggtacc
ctggagtgtggagcatgcaggtgcaatgagggacgtatcggcagactttgtgaatgtagt
aaagacgaggtcagaacagatgatctggacgcgaactgccgcatggataacgggacggac
atctgcagcaacaatggggactgcgtttgtggaacatgtgagtgcaagaaaagagacaac
cctgaggagagatacagcgggaagttctgcgagtgtgacaacttcagctgcgaccgctcc
aacaacaagctctgcggaggtcatggtcgttgtgaatgccgaaagtgtatgtgtgacgct
aactacacgggcagtgcgtgcgactgctctctggacacctccacctgtctggccagtaac
aaacagatctgtaacggtcggggcacctgcgactgcggccagtgcaaatgtaccgactta
aagtttcagggtccaacttgtgaaatctgcccaacctgccccggagtctgtactgaacac
aaggattgcgtccagtgccgagcatttggtactggtgaaaagaaagacacgtgtaacgaa
caatgtaacaacttcattcttgtaaagaagaagaagaaggaagaacttcctcagcccaac
gaccagccatacatcaatcactgcaaagagcgcgatgctaatgactgttggttcttcttc
acctacgctactaagaacgacagcaccgttgaggtccatgtggtagaggaacttgagtgt
ccctctgcccctgacatcatccccatcgttgcgggtgtggtcgcaggaatcgttctgatt
ggtttagcacttctgctcatctggaagctgctcatgattattcatgaccgcagagagttc
gccaagttcgagaaagagaagtcgaatgccagatgggacacaggtgacaaccccatctac
aagagtgctgtgacaaccgtagtaaaccccaaatatgaggggaaatga
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integrated database retrieval system
