Carassius auratus (goldfish): 113121254
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Entry
113121254 CDS
T07313
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113121254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113121254
03021 Transcription machinery [BR:
caua03021
]
113121254
03036 Chromosome and associated proteins [BR:
caua03036
]
113121254
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
ARID
113121254
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113121254
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113121254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
113121254
NCBI-ProteinID:
XP_026147353
Ensembl:
ENSCARG00000021852
UniProt:
A0A6P6RQY5
LinkDB
All DBs
Position
20:complement(24310855..24393425)
Genome browser
AA seq
2160 aa
AA seq
DB search
METGLLANHQVKNVVSGDPPPSPHHRTPPQQQSQASLHQQQPQQRAVHNNNNIHPTPVRG
DRQQHGGKENALETQVDRHPRLLNTSDEEERSSTTGGDRMGSRYEHSHFGPTSNNNNNNN
SGGSASQSGNSSVSEFNHYYGNGRGGPCFDQHGGQQSPRTALMHQAQGSMDQVQNSHEGY
HNNPYNHYPNYRPGYGGAGYGMMSPSRQGNMMGPVTNSPNAAAASHGKAAMASNTPAPGA
NVGGFPRFPGQNQQHPSGATPTLNQLLTSPSPMMRGYGSGYQDYSTPQQQQQQPGMGLGK
DMSSPYSPAASHGWGAQQRNHPAMSPGNNGNSRAQVAPMDPMAMKRSQIYAMGNSPYSQS
GGTYPGQPYGSPTPHRYPMGMQGRGQVGMGGMQYPQQQQMPAQYGSQGMGGYCQQGQPPY
FSPPQHQSAAPSQPPYMQQRAPAQQETLQEGYGSRGQSGKPNHDDMSLTQQDRPSSLPDL
SGSIDDLPTGTEAGLSSAVSASGSTSSQGEQSNPAQSPFSPHASPRVPSMRSGPSPSPVG
SPVGSSQSRSGPISPASGPGAQMAPQTPGNVPDTGSHSTHSQSPMSQERGFAPNMQRNAP
GPQFGGQQPGPSMSPHSCPTGPMHHSVSSYQLGTSYGPQSAQYGPSGNYTRPPNYGGAPG
ANYSGPGPGMANSLAMNASSPMHGQGPGQPCGSVTTARGPGHAAGGRPYPAGSSSVAPAS
PNMPQSAGPGMGPPPLNVSRKPHESGPGSGQQNPVPSGQPRPPFGRSPVYPGLSGPGGRP
ASFPVPQPHHPHYSSGQSQGQPHAELYGPGGYQGGPHMLGMGPGGPYNHPVSNSSARMIP
QGPSYNTMPTGPMTGSGDSMMPTDPKKEEGSTPTTEPPKPKDNYGSQCLSQPPTPSPLSP
SPASLSSYQGDDSDSISSPAWPKNPSSPKHSSGNMTNERITRLYDMGCEPERRAWVDRYI
AFMEERGTPVPNLPSVGKKPLDLCRLYLCVREIGGLAMVNKNKKWRELSTHLNVGTSSSS
ASSLKKQYIQYLFAYECKVERGEEPPPDAFTTGDGKKQPQQAKIQPPSPANSGSLQGPQT
PQSTGSSTMTEMPGDLKPPTPASTPHGQVTPQQTGRNSGVSVQDPFSESSDPAFQKRGPM
HGGSSGDGSSRMQFDTSKDPYGAARKGGSEPFIPGQMPGSGMQEMYPRGPPSGMGMGPRP
QYPYNPGFERRPDHVMGPEGGIVPPGNQNSMVPSNSDPSMFSGNRYASHQRHGHDGYGQQ
YPHSMPYTAHGMYPQQQGYKRPGEGMYGPPAKRHESEAYGLQYGGQQTDMYSQYGYPERR
PMQSPFPYPYGRDRMQPGGQGPPQHSMMSGGPSPSSNSSGGPQGNMWHTRHDMSYPYPGR
QGHGAPYPSMSRGDDPEVRAGQDSQWPGQRQSPYPPPHSSSSSSSMTPMTSRQPPSSYQS
PPAMPNHISRVPSPSPFPRSVGGSMSPNKAHMMASMKQMQKPGGPGSMPNSQSSGLPGQG
FPTIHREATYPLDSVEATQPQLKPRRRLTSKEIGTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDNTVSSFGLSQMPGFLELIVEYFRRCLIEIFGILEEYEVGTEGQKTLLGPSSEP
TKTEQPSNQDLKSQSGSELVERLDVEPEKPQPSSSEAALNMEKREDSAEVKVDTGEEPCP
PVEPRPKQASKYDRLPVKVEEREAVADCVEDRSELLGLAREFTSGLLHWTAGGGDSTAHI
QTHFERRREEEEEEQKPSEIQGGAQAPGQETVEGEHGREEELKRELPGPSEENLTATVDD
MLSSRNSETLETQTSFSFRNRGNQSGIALLEDEPRCWDEAPLSVAEGWQDELAKRCVCVS
NIIRGLSFVPGNDSEMARHPGLVLILGKLVLLHHEHPKRKRMPPTYQREEERGLACSKDE
WWWDCLGALRENTLVTLANISGQLDLSIYPESICLPILDGLLHWMVCPSAEAQDPFCTAN
GFSSLTPQRLVLECLCKLSIQDSNVDLLLATPPFSRQEHLFATLVRHVGERKSQVCREMA
VAVLSNLAQGDPTAARAVALHKGSVGALISFLEDSVAMAQYQQSPHSLLGHMGHSTHPEP
PSINMMCRAAKALLAMARVEENRPEFVLYESRLLDISLSSVLNSGVAAILCEVLFKLGRS
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtctgctcgcgaatcatcaagtgaaaaatgttgttagcggagatccccct
ccttcgcctcatcatcgcacacctccacagcaacagtcgcaagcatcactccatcagcag
cagccacagcagcgagccgtgcacaacaacaacaacatccacccgacacccgtgcgcggg
gatcgacagcagcatggagggaaagaaaacgctctggagacgcaggtcgatcgccatccg
cgtttgctgaacacaagcgacgaggaagagcgctcgtccacgaccggaggggatcggatg
ggcagcaggtacgagcactcacacttcggaccaacgagcaacaataacaacaacaacaac
agcggcggcagcgcgtcccaaagcgggaacagctccgtttctgagtttaatcattattac
gggaatggaagaggagggccttgctttgatcaacatggcggacaacaaagccctaggacg
gctttaatgcatcaagcacagggcagcatggatcaagtgcaaaactcccacgaagggtac
cataataatccgtacaaccactaccccaactaccggccggggtacggtggcgctggatac
ggtatgatgagcccgtcgcggcaggggaacatgatgggcccagttaccaactcgcctaat
gccgctgctgctagtcatggcaaggctgctatggcctcgaataccccagctcccggtgcc
aacgttgggggctttccgaggttccccggacaaaaccaacagcacccctctggagctaca
cccactctaaaccagctcctgacctctccgagtccgatgatgcgcgggtatggcagcggt
tatcaggactacagcaccccgcagcagcagcagcagcagcccggcatgggtctgggcaaa
gacatgagctccccgtacagccccgctgccagccacggctggggagcacaacaaagaaac
cacccggccatgagccccgggaataacgggaacagcagagctcaggtggcacccatggac
cctatggccatgaagcgttctcagatatatgcgatgggcaacagtccctactctcagtca
ggaggaacatatccagggcagccatacggatcacccactcctcaccgatacccaatggga
atgcaggggcgtggccaagtgggcatgggagggatgcagtaccctcagcaacagcagatg
ccggctcaatatgggtcccagggaatgggtggctactgtcaacagggtcagcccccatac
ttcagtcccccacagcatcagtctgcagccccctctcaacccccttacatgcagcagcgc
gctccagcacaacaggagactctgcaggagggatatggtagcaggggccagtctgggaaa
ccaaaccacgatgacatgagtcttactcagcaggatcgcccgtccagcctcccggatcta
tctggctcaatagatgacctccccaccggaacagaggcgggtctcagttcggccgtcagc
gcttcgggttccaccagtagccagggagaacagagtaaccccgcccagtcgcccttctca
ccccacgcctcgccccgggtccccagcatgagaagtgggccctcgccttcgccggttggg
tcacctgtgggctccagccaatcacgatctgggcccatatcacctgccagtgggccaggt
gcacagatggcccctcagaccccagggaacgttccggacacgggctcccattccactcac
agtcagtcgcccatgtctcaggagagaggatttgcacctaacatgcaacgcaatgcacct
ggtccccagtttggaggccagcagcctggaccttctatgtctccacactcctgtcccact
ggccctatgcaccatagtgtgagctcctatcagctgggcacctcttacgggccccagagt
gcccagtatgggccttcaggtaactacacacgccctcctaactatggcggggcaccaggt
gccaactacagcggccccggtccaggcatggccaacagtcttgccatgaatgccagcagt
ccaatgcacgggcagggtccagggcaaccctgtggctctgtgaccacggctcgaggacca
gggcatgcagccggcggccggccgtacccagcaggctccagcagtgtggctccagcctca
ccaaatatgcctcagtccgctggcccaggaatgggtccacctcctctcaacgtcagtcgc
aaaccccatgaaagtggccctggatctggccagcagaacccagtcccctctggacagccc
aggcctccctttggcaggtcccctgtatacccgggcctgtctgggcctggaggacggcca
gcctccttccctgtccctcaaccccatcaccctcactacagttctgggcaaagccagggc
cagcctcacgctgagctgtatgggccaggcgggtatcagggtggtccccacatgcttggg
atgggtcctggaggcccctacaaccatccagtgagcaacagctcagccaggatgatccct
caaggaccgtcctacaacacaatgcccacagggcccatgacaggctcaggggacagcatg
atgcccaccgatcccaaaaaggaagagggcagcacacccaccacagagcctcctaaacca
aaggacaactacggttcccagtgtttgtcccagcctcccaccccgtcccctctgtccccc
agcccagctagtctgtcctcttatcagggggacgacagcgatagcattagcagccctgcc
tggccaaagaaccccagcagccctaagcacagctcggggaacatgacaaacgagaggata
acacgactgtacgacatgggctgtgagccggagaggagggcatgggtggatcgctacatc
gccttcatggaggagaggggcacgcctgtccccaacctgccctccgtaggcaagaagccg
ctggatctgtgccgcctctacctctgtgttcgagaaatcggaggcttggctatggtcaat
aaaaacaagaaatggagagagctgtccacccacctgaatgtggggacatccagcagctct
gccagttccctcaagaagcagtacatccagtacctgttcgcctatgagtgcaaggtggag
cgcggagaggaacccccacccgatgcgttcactacaggagacggcaagaagcagccgcag
caggccaagatccagccaccatcacccgcaaactcgggctctcttcaagggccacagact
cctcagtctacaggcagcagcactatgacagagatgccaggggacctaaagccgccaaca
ccagcgtccacaccccacggacaagtgacccctcagcaaacgggcagaaacagtggtgtt
agtgtgcaagacccgttctctgaaagcagcgacccagcctttcaaaagcggggtcccatg
cacgggggaagcagtggagatggctcctccagaatgcagttcgacaccagtaaggatccc
tatggagctgctaggaaaggtggctctgagcccttcatccccgggcagatgccaggcagt
ggcatgcaggagatgtatccacgtggaccgccctccgggatggggatgggcccacgaccc
cagtacccctacaaccctggctttgagaggaggccggaccatgtcatgggtccagagggg
ggaattgttccccctggaaatcagaacagcatggtgccttccaacagtgatcccagcatg
ttctcaggcaacagatacgcttctcatcagagacatggacatgacggctatggacagcag
taccctcacagtatgccatatactgcacatgggatgtatccccaacagcagggttataag
cggcctggggaagggatgtacggccctcctgcgaagcgccatgagagtgaagcctatggt
ttgcagtacggtggccagcagactgacatgtatagccaatatggttacccagagcgcagg
cccatgcaaagcccgttcccctatccatatggacgcgatcgcatgcagccaggtgggcag
ggacctcctcagcacagcatgatgagtggtggaccatccccatcctccaactccagcggt
ggtcctcaagggaacatgtggcacaccaggcacgacatgagttacccttaccccggccgg
cagggccatggggcgccctacccctccatgagccgtggagatgatccagaagtcagggcc
ggtcaggacagtcagtggcctggtcagcgtcaatccccctaccccccaccacactcttcg
tcctcttccagctccatgacccccatgactagccggcaaccaccttcttcctatcaatct
cctccagcgatgccaaaccatatctctcgagtcccaagcccttcaccattccctcggtct
gtggggggctctatgtcgcccaataaggctcatatgatggcctctatgaagcagatgcaa
aagccaggaggcccagggtcgatgccaaactctcaaagtagtggtcttcctgggcaaggc
ttcccgacaatccatcgggaagccacttacccactggactctgtggaagctacgcagcct
cagcttaaacctcgccgaaggttaacatccaaagaaattggcacaccagaggcttggcgt
gtgatgatgtccctgaagtctggtttgcttgctgagagcacatgggccctggatactata
aacatcctgctttatgatgacaacacagtgtcttcctttggcctgtctcagatgcccggt
ttcttggagctcattgttgaatatttcagaaggtgcttaatagagatctttgggatcctt
gaagaatatgaagttggaacagaaggtcagaaaactcttcttggtccatcgtcggagccc
acaaaaacagagcaaccttccaatcaagacttaaaaagccaatccggttcagaactggtg
gagagattagatgtggagcctgagaaacctcagccaagcagctcagaagcagcactcaat
atggagaaaagggaagactctgcggaggttaaggtcgacactggtgaagaaccatgtcca
ccagtggagcccagacccaagcaagccagcaagtatgacagactcccagtgaaagttgag
gagagagaggctgtggctgactgtgtggaggatcgatccgagctgctaggcctggcccgg
gagttcaccagcgggcttctgcattggacggctggtggaggggactccactgcccacatc
cagacccattttgagagacgtagagaagaagaagaagaagaacagaagccctcagagatt
caaggaggtgcacaggcaccaggacaagaaacggttgaaggggagcacgggagggaagag
gaactgaaaagagagcttccggggccctcagaggagaacttgacagccaccgtggatgac
atgctaagttctcgaaactcagaaactctcgaaactcagacatcattctccttccgcaac
agagggaaccagagcggcattgccttgctggaggatgagccccgatgctgggatgaagca
cctctttcggtcgccgagggctggcaggatgagttggccaagcgctgcgtctgtgtgtcc
aatatcattcgtggactctcattcgtcccgggcaatgacagcgaaatggctcggcaccca
ggtttagtgctcattctcgggaaacttgtgcttctgcatcatgagcaccctaaaaggaaa
aggatgccacctacctaccagcgagaggaagagcgaggactggcttgcagcaaggacgaa
tggtggtgggactgccttggggccttgcgtgagaacaccttggtcacccttgccaacatt
tcaggacagctagacctgtccatctatccagaaagtatctgccttcccattctggacggg
cttctccactggatggtgtgcccctcagcggaggcccaggaccccttttgcacggcaaat
ggcttctcctcgctcacgccgcagaggctggtgctggagtgtctgtgcaaactgagcatc
caagactctaacgttgaccttctgctggccacgcctccttttagcagacaggagcacctc
ttcgccacattagtgcggcatgtcggtgagcgaaagagtcaggtgtgccgcgagatggcc
gtagccgttctctccaatcttgcacagggtgaccccacagctgcccgagccgttgccctg
cacaagggcagtgtgggagccttgataagcttcctagaggacagtgttgcaatggcacag
tatcagcagagccctcacagtctcttgggacacatgggacactccacccatcccgagccg
cctagcatcaacatgatgtgccgggccgccaaagccctgctggccatggcccgagtggag
gagaacaggcctgagtttgtgctctacgagagcaggcttcttgatatctcgctgtcctcc
gtgctgaactctggcgtggcggccatcttgtgtgaggtactgtttaaactcggccgctcg
tga
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integrated database retrieval system
