Carassius auratus (goldfish): 113121265
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Entry
113121265 CDS
T07313
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113121265 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113121265 (rev3l)
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113121265 (rev3l)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
113121265 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
113121265
NCBI-ProteinID:
XP_026147370
Ensembl:
ENSCARG00000025595
UniProt:
A0A6P6RPU9
LinkDB
All DBs
Position
20:25009959..25115431
Genome browser
AA seq
3016 aa
AA seq
DB search
MFSVRIVTADYYMSSPIRELDVCYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGFEHDADRYLRQLAYSIDRALNVSMGNPSSNVQHIFKVVLVSGMPFYGYYMKEK
TFMKIYLYNPQMVKRVSELLQGGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAV
KFRKKQATVGEHMSNRGGNCSPYKYPCTSKLSDGGLSDTMRWEDDNIPSSLILEEVERMS
VCELEVDAVAADVLNRLEIENQIGRNPGLQAIWDDEKQRRQEGGQSSHIDMPESQDRGFV
EFAESEKIFVKRFKEILKENEFDMTQTGSEVESFPDLSIYPDVLSPDDLPCIPASQVDVH
QDAFKGTKRHGGKDAEVAVVDEEAILSLLENSQTFLPHSQGPNQSAILDSSEDQALVDLF
EALADDGFRTDRSRAVSQQLSGIASYVCNSDDEEAGPELEKEESELSRIMSQRWDCDMSG
PSAAQKSPDIPLCMKEANESSSEEQQASSDEELYWKGNSALLTDLSIPQLDGAADENSDS
SITDKESRTRSSLKAPDKILGSRNVFPNEAVCMEPPSSAKIVIEYKCAEQKLNQEDLAER
HLKSEEANEYSTGLRVNKEMPYIPPVKHPIPFKTANLPKPGGEKIGVHSLYTDENQATGL
NQPDPDDSIFGNSKLDQSIRNSTSIKNVEKKNVSIPKNHKSFFVCYSELMNCPTKTEIQL
SPNDCRRPVIHFDQTQSPMEDNQALGPQEGDTGQDKKEEDVSKLKIRYEDYQENKTERTI
VAQQEAHYKFFPSVILSNCLSRPIKKQTGSKTGDCCSTLDPPEQRRSRLKLIKKKTTLGQ
KRVSPVRTPSPMKEEGTALLSNTVGSLNQKEMYKEVDMDISDPPTIEGLIKNSVEDELAD
IPTKISCTKVSSLPGSKYTLRAKRKMTFDGENGDQASSGSFKQALVQHEGLKGKDHVFSQ
KKRKLTKKEPPIIIKYIIINRFKGQKNMLVKISKIDTDEACTVLTPEKLAKYKRLAPLKE
FWPKVPESTAVKYPLLEPKVKKCPKRKAKVNPVSKRTGISPKSRFPRAGKTRRVKHAKAL
ITLPKLPPPRPCYNEFTDDCCTEYSDVMVELGYLSERASSPTDSTPPRCWSPTEPLLESN
SNLINPHNDPCLGEVLAPKPYQRGIWDRSRTPRSKKTSATRPKRKANTSTKSVNKDSVKS
VDSQRKGIRMASRRHKKRCESIEGIPLEDDTSTSQKDRMLNEKQVPKRKQVRDEESDNSQ
ALHSVNNAPITSSSDDLTPYQDPSSLKSSQEDFTISCSGSQTVVTSPGKKSNQDVVFVFN
AIASNELQKDTEIVLNPCIEKSLNRILSPSTKKVGHPCSVITYSNSKSQNMSQDGTVTKN
LYELKSEVSDHEENTRTAQHLQSTRKTTIKSRRLQTKKKDTITLLDSVDCRPSLMPSAKS
AIKAGFHTGLTLSSDPKIDEMCVTELPSGLAVLKELLQKRQLKAGQDPHESDRVTEEMSS
TSHPTDIPKTAKSKTPHSATSRKPRGARTKVPKELQFKIRSKKMKPDDLRIDHLSSDDSP
VIFSDPGFDSCCSIEDSLSPELPDNYSFDINAIGQTEFSSLYSGNQFVLTDRILPQKFLS
DVSQEAINALVGLGDRTQKVFDESSKHELDWHKSGTLSPELFDKSFCESGKVYSNKVSLD
SEKIFCKDWGGSLGKIHGLSHFQDFHCEKKDVLLDPEPFSPLTSASFAYNGVSPNSDPLD
GSSATPSSSPQSINSLSQLKNGALSSKSGGTHILKPLMSPPTREEILATLMDLDLSEATY
QEPFCSDPSDAPLKPREVGGRKLILETRLANKLVEFHGDLSQNGLQFWKIAFSAMTNQAY
APNNGCKSSILTKDKNPFSGSDQKVIMLPCKCAPSREQVQFWLQAKNQYACLQSDKKQVG
DQTTVELGTYDRTSHQNEDYNSPSSENHDKRWNKKDEKASELQSIRRNSLSLPLHISPVK
AASSNSSPKSTKCILDIETNKGCQITSPYSPDLSTLQQISAEIKEDEDQKDLTDLLQSHS
LEQSQNLNDTSLESVHPKDLLSPSVFPVKHLDSDVKCSYQLHSTPVHRRSYIDDDGSSYS
PIRNEDIKPRSQQIHQKGKKNKDALRRVLLTTQMKNQLTTMNVQKRENSQIEGPSICNSY
GFKVSMQNLQEAKALHEVQHLIMISMELHARTRRDLEPDPEFDPICALFYCLSSDVPLPN
CGTTQMTGAIVIDKDCCSSAQASSNTAPLLFKSGVTGLLVTYVSDEKELFEEVTNVLRKY
DPDILVGYEVQMHSWGYLLQRSSTFGIDLCQQLSRVPGDAKENRFTAEKDEYGADTMTEI
HIVGRVVLNLWRIMKTEAALNNYTFENVAFHLLHQRFPLYSHRTLSDWFDHNTHLHRWKV
VDHYVSRVCGTVQLIQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPMNY
IPVTPSTQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYCFSTCLGR
VENLGTCDEFRFGCTSLRVPPDLLYQLRNDITISPNGVAFVKSSVRKGVLPSMLEEILKT
RIMVKQSMKAYKNDKALLRLLDARQLGLKLIANVTFGYTSANFSGRMPSVEVGDSIVHKA
RETLERAIKMVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPI
KLKFEKVYLPCVLQTKKRYVGYMYESLDQKNPIFDAKGIETVRRDGCPAVAKILERSLKL
LFESRDISHVKQYVQRQCVKVLEAKASMQDLIFAKEYRGSGSYRPGACVPALELTRRMMA
YDRRLEPRVGERVPYVIVYGMPGVPLIQLVRRPVEVLQDASLRLNATYYITKQILPPLAR
IFNLIGVDVFSWYHELPRVQKAWSSVNGGGEEGTRKGTISQYFTTLHCPVCDELTQLGVC
EGCRAEPQRVVVHLHQDLRLWESQLDQLQKVCRSCSGSAERQVPCVSLDCPILYKLSRVN
RSLSRGPYLRQLLEQF
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagtgcggatcgtcacggcggattattacatgagcagtccgatcagagagttg
gacgtctgttactctgagttcagagagagcgatgtcaagaaagtgcccgtggtgcggata
tttggggccacaccagcaggccagaagacttgtctacatctgcatggtgtgttcccatac
atctatgtgccgtatgatgggtttgaacatgatgcagatcgttaccttcggcagttggcc
tacagtattgacagagccctgaacgtcagcatgggaaacccctcgtctaatgtgcagcac
atctttaaagtggttctggtgtctggcatgcctttctatggatactatatgaaggaaaaa
acctttatgaagatttacctgtacaacccacagatggtcaaaagggtgagtgaactcctg
cagggtggagctgtaatgaataagagttttcagccccatgaagctcacattcccttcctg
ctgcagctctttatcgattacaacctctacggcatgaacatgatcagtcttgctgctgtt
aagtttagaaaaaaacaagcaacagtaggagagcatatgtcaaatagagggggtaactgc
agcccatataagtatccctgcacgtctaaactcagtgatggcgggctgagtgatacaatg
cgctgggaagatgacaacataccaagttctctgattttagaggaagtggaacgaatgagt
gtctgtgagctggaggttgatgccgtggctgctgatgttctcaaccgcctagagattgag
aatcagattggaagaaaccctggtcttcaggccatctgggatgatgagaaacagcgacga
caggagggaggtcaaagttctcatattgacatgcctgaatcacaagatcgaggctttgta
gagtttgcagagagtgaaaaaatcttcgtgaagagattcaaagaaattctcaaggaaaat
gaatttgacatgactcaaactgggtctgaagttgaatctttccctgacttatcaatctat
ccggatgtgctgagcccagatgacttgccttgtatacctgccagccaagtggatgtgcat
caagatgcatttaaaggcacaaaaagacatggtgggaaagatgctgaagtggcagttgtt
gatgaagaggccattttaagtttgttggaaaacagtcagaccttcctccctcattctcag
ggacccaaccaatcagcaatacttgacagcagtgaagaccaggctttggttgatctgttt
gaagcgttggctgatgatggatttagaaccgacaggtccagagcagtgtcccagcagttg
tctgggattgctagttatgtctgtaacagtgatgatgaggaagctgggcctgagctggag
aaagaggaatcagagctcagtagaatcatgtcccaaagatgggactgtgacatgtcagga
ccttctgctgcacaaaagtcaccagacatcccattatgtatgaaagaagcaaacgaaagc
tccagtgaagagcaacaggcctcatcagatgaagaattatattggaagggaaacagtgct
ctacttactgatctgtccattccacagttggatggagctgcagatgagaatagtgattca
tcaataacagacaaggaatcccggacacgctcgtcacttaaagcaccagataagatcctt
ggaagcagaaatgtttttccaaatgaagctgtttgtatggagccaccatcttctgctaaa
attgttattgaatacaaatgtgctgagcagaaactcaatcaagaggatttagcagaaagg
catttaaaaagtgaagaggcaaatgaatattcaactggattaagagttaacaaagagatg
ccatatattccaccagttaaacacccaattccttttaagactgcaaatttacctaaacct
ggtggtgaaaaaataggtgtacactctttatacactgatgaaaaccaagccactggcctt
aatcagccagatcctgatgattcaatttttggaaactctaaacttgaccagagcataagg
aattctaccagtattaaaaatgtggagaaaaaaaatgtatccatccccaagaatcacaag
agcttctttgtatgttactctgagctgatgaactgccccaccaagactgaaatacaactc
agtccaaatgactgcagaagacctgtgatacattttgaccagacacaaagccctatggaa
gacaaccaagctttgggccctcaagaaggtgacacaggacaggataaaaaagaggaagat
gtcagcaaactaaaaataaggtacgaggattaccaagagaataaaactgagaggacaatt
gtggcacaacaggaggcacactacaaattttttcccagcgttattctgtctaattgcctc
tccagacccatcaagaaacagacagggagcaagactggggattgttgctctaccttagac
cctcctgagcagcgaaggtcaaggttaaagttgatcaaaaagaagacaacattgggtcaa
aaaagggtaagtcctgtgaggaccccgtctcctatgaaagaagaaggcacagcacttctt
tccaacactgtaggctctcttaaccagaaagaaatgtataaggaggttgacatggacatt
tcagatccaccaaccattgaaggtttgatcaagaactcagtagaggatgaacttgcagat
attccaacgaaaatctcttgcaccaaggtgtccagtttaccaggtagcaaatataccttg
cgggcaaaaaggaaaatgacttttgacggtgaaaatggagatcaggcaagttctggttct
ttcaaacaagctttggtgcaacatgaaggccttaagggcaaagatcatgtctttagccaa
aaaaagaggaaactgactaaaaaagagccaccaatcatcattaaatatataatcattaac
agattcaagggtcagaagaacatgttagtgaagatttctaaaattgacactgatgaagct
tgcactgttttaacaccagaaaagcttgccaaatacaaaagacttgctcctctcaaagaa
ttctggcccaaagtgccagagtctacagcagtgaagtacccgctacttgagccaaaagta
aagaagtgtcccaaacgaaaggctaaggtgaacccagtgtcaaagagaactggcatctct
ccaaaatctaggtttccacgagctggtaagactaggagggtgaagcatgcaaaagcactg
ataactttaccgaaattaccccctccacggccttgttataatgagttcactgatgactgc
tgtacagagtattctgatgtgatggtggagttgggttatttgtcagaaagagcctcaagt
cctactgattcaaccccacctaggtgttggtctcctactgagcccttactggaatcaaat
tcaaatctaataaacccacataatgatccatgtctaggtgaagtactagctccaaaacca
taccaaagaggtatttgggatagaagcagaacacccaggtctaaaaagacttctgctacc
agaccaaaaagaaaagctaatacttcaacaaagtcagtgaataaagattcagtgaaatct
gtggactcacagaggaaaggtattcgaatggcttcaaggagacataagaaacgttgtgaa
agtattgaaggaatccctttggaagatgacacctctacctctcagaaagacaggatgctg
aatgagaagcaagtcccaaaaagaaagcaggtccgagatgaggagagtgataattcacag
gctctacattctgttaataatgcacctattacttcctcatctgatgacttaactccttat
caggatcccagttctctaaaaagcagtcaagaggactttactattagttgttcaggctct
caaacagtggtcactagccctggaaaaaaatctaatcaagatgttgtttttgtcttcaat
gccattgcctcaaatgaattacagaaggacacagagattgttctcaatccctgtattgaa
aaatctttaaatcgtattctttccccttccaccaagaaggtaggacatccatgttccgtc
atcacatacagcaattcaaaatcacaaaatatgagtcaagatgggactgtcacaaaaaat
ctatatgaattaaagtcagaggtctctgaccatgaagagaacaccagaactgcacagcat
ttgcagtcaaccagaaaaacgaccattaaatcaagaagactgcaaacaaaaaagaaagat
accataactttattggattctgtcgactgtagaccctcccttatgccctctgctaagagt
gcaattaaagctggatttcacacaggtctaacattgtcctcagaccctaaaattgacgaa
atgtgtgtcactgagttaccttctgggcttgctgtgttgaaggaacttctccaaaagagg
caactcaaggccggacaggacccacatgaaagcgatcgtgtgactgaggaaatgtcttct
accagtcaccctactgatattcccaaaacagccaaatctaaaacacctcattcagcaacc
tcaagaaaaccaaggggtgcaagaacaaaagtaccaaaagaattacagttcaaaatcaga
agtaaaaaaatgaaaccggatgatttgagaattgaccatctttcatcagatgatagtcct
gtgattttctctgaccctggctttgatagctgttgctcaattgaagatagcttgtcccca
gagctcccagacaattacagctttgatatcaatgccattgggcaaacagagttctccagt
ctttattctggcaaccagtttgtgttaactgataggatcttgcctcagaagttcctcagt
gatgtcagtcaggaggcaatcaatgcccttgttgggttaggcgacaggacacaaaaggtg
tttgatgagagcagcaagcatgaactggactggcataagtctgggactctaagtccagaa
ctgtttgataagtcattttgtgaaagtggcaaagtttattccaataaggtatctcttgat
tcagaaaaaatcttttgcaaagattggggaggctctttaggtaaaattcatggccttagc
cactttcaggactttcactgtgaaaagaaagatgtgttgctcgacccagagcccttttcc
ccccttacttctgcttcttttgcttataatggtgtttccccaaatagtgatcccctagat
ggcagttcagcaacaccaagcagttccccacagtccatcaactcactgtcccagctaaaa
aatggagctctgagttcaaagagtgggggaacacacattctcaaacctctcatgtctcca
cctactcgggaggaaatcttagctactctgatggatctggacctctcagaagccacctac
caggaaccattctgcagtgacccatcagatgcacccttgaagccaagggaggttggtggt
cgaaaattgattctggaaaccagactggcaaacaaactagttgaatttcatggagactta
tctcaaaatggcttacaattttggaaaattgcattttctgcaatgacaaatcaagcctat
gcaccaaataatgggtgtaaatcctctatactgaccaaggacaaaaacccattttctggc
agtgatcaaaaagtgattatgcttccctgcaagtgtgccccaagtcgagaacaggtacag
ttctggttgcaagcaaaaaaccagtatgcttgccttcagagtgacaagaaacaagtgggt
gaccagacaactgtggaacttggaacatatgacagaacctcacatcaaaatgaggactat
aattcaccttcctcagagaatcatgataaaaggtggaataaaaaagatgaaaaggcttca
gagttgcagagtatccgtaggaatagtttaagtttaccactccatatttcaccagttaaa
gcagcttcatctaacagtagccctaagagtacgaaatgcatcttggacatagagacaaac
aaaggttgtcagatcacttctccatattctcctgatctttctacattgcaacaaatatct
gctgagattaaagaagatgaggaccagaaggatttgactgatttattacaatctcacagc
ttggagcagtctcaaaatctcaatgacacatcacttgaaagtgtacacccaaaggacctc
ttgagtccatcagtttttcctgtcaaacacctagattctgatgtcaaatgctcttaccag
ctccatagcacacctgtccaccggagaagctacattgatgacgatgggtctagctacagt
ccaataagaaatgaagacataaagcccagatcacagcaaatacatcagaagggtaaaaaa
aacaaagatgccttacggagagttttgcttaccacacaaatgaagaaccagcttaccact
atgaatgttcagaagagagaaaactcccagattgagggaccatcaatctgtaattcatat
ggctttaaagtcagtatgcagaacttgcaggaggccaaagcattgcatgaggtacagcac
ctcataatgataagcatggagcttcatgcaaggactcgtcgtgaccttgagcctgaccct
gaatttgacccaatttgtgctttgttctactgcctcagttctgatgtccctctcccaaat
tgtggcactacccagatgacaggtgccattgtcattgataaagattgttgttcttcagct
caagcctccagcaacacagcgccactgctttttaaatctggtgtgacgggactgctggtg
acctatgtcagtgatgagaaggagctttttgaagaggtcacaaatgttcttagaaagtat
gacccagacattctggttggatatgaggtccaaatgcactcttgggggtatctactgcaa
cgttcatcaacattcggtatagacctgtgccagcaactctcccgtgtgccaggagatgca
aaagaaaatcggtttacggcagagaaagacgaatatggtgcagacactatgacggaaatc
catattgttggacgtgttgtcctcaacttgtggaggattatgaagactgaggctgcactg
aataactacacttttgagaatgtggctttccacctcctgcatcagcgctttcctctctac
agccatcgcacactgtctgactggtttgaccacaacacacacctgcacaggtggaaagtg
gtggatcattatgtgagccgtgtgtgtggcacagtccagttgatccagcagcaggatatt
atcggcaggacaagcgagttggcacgtgtgtttggaatccagttctaccacgtgctaact
agggggtcacagtaccgtgtggaatcaatgatgttaaggattgcaaaaccaatgaattac
atcccagtcactccaagcacacagcagcgtgcccagcaaagagccccacagtgcattccg
ctcgtcatggagccagagtcgcgtttctatagcaactctgttattgtgttggatttccag
tctctgtatccatccatcatcattgcctacaattactgtttctccacctgccttggacgc
gttgagaatcttggaacgtgtgatgagttcaggtttggttgtacatctctgagagtccct
cctgaccttctttaccagctcagaaatgacatcaccatttctcccaatggtgtcgcattt
gttaagtcatcagtgcggaagggtgtcctgccaagtatgctggaggagattttgaagacg
aggatcatggtgaagcagtcaatgaaggcgtacaaaaatgacaaagctctattacgcctg
ctggatgcaaggcagcttggccttaaactgattgctaatgtcacatttggttatacttct
gccaacttctcaggacgtatgcccagcgttgaggtaggtgacagcattgtgcacaaggcc
cgagagactttggagagagccataaagatggtcaatgacacgaagaagtggggagcacgt
gttgtctacggagatacagacagtatgtttgtgttgttgaaaggagcaaccaaggaacag
gcatttaagattggtaatgaaattgcagaggctgtcactgctaccaaccctaaacctatc
aaattgaagtttgagaaggtgtacctcccgtgcgtgttacagacaaagaagcgttatgtt
ggatacatgtatgagagcttggatcaaaaaaacccaatctttgatgccaaaggcattgaa
actgtacgtcgtgatggctgccctgctgttgccaagattctggagagatctctgaaactg
ctttttgagtcacgtgacatcagccatgttaagcagtatgtgcagcggcagtgtgtgaag
gtgctagaggccaaagccagcatgcaagacctcatttttgccaaagagtaccgtggcagc
ggatcgtaccgaccaggggcctgtgtacctgctctggaactcaccaggcgtatgatggcg
tatgatcgacgcttagagccacgcgtgggcgagcgtgtaccatatgttattgtgtatggg
atgccaggtgtgccgctcatacagctggttagacgtcctgtagaggtactgcaagacgcc
agtctgcgccttaatgcaacctactacatcaccaagcagatcttgccaccactcgcacga
attttcaacctgattggagtagatgtgttcagctggtaccacgagttgccaagggtacag
aaggcgtggagctctgtgaatggaggaggggaggagggcacaagaaaaggtaccatctct
cagtactttaccacgctgcattgcccggtttgtgatgagctgacacagctaggagtgtgt
gaaggctgtcgggctgaaccacaacgtgttgttgttcacctacaccaagacttgcggctt
tgggaaagccagctagaccagctccaaaaggtatgtagaagttgcagtgggagtgcagag
cgtcaggtgccatgtgtctcattggactgccctatactctacaaattatctcgtgttaat
cggagtctttcccgaggaccataccttcgccagctgctggagcagttctga
DBGET
integrated database retrieval system
