Caulobacter sp. NIBR1757: AMEJIAPC_00090
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Entry
AMEJIAPC_00090 CDS
T10944
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03030
DNA replication
caub03410
Base excision repair
caub03420
Nucleotide excision repair
caub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMEJIAPC_00090 (polA)
03410 Base excision repair
AMEJIAPC_00090 (polA)
03420 Nucleotide excision repair
AMEJIAPC_00090 (polA)
03440 Homologous recombination
AMEJIAPC_00090 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caub03032
]
AMEJIAPC_00090 (polA)
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_00090 (polA)
Enzymes [BR:
caub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMEJIAPC_00090 (polA)
DNA replication proteins [BR:
caub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMEJIAPC_00090 (polA)
DNA repair and recombination proteins [BR:
caub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMEJIAPC_00090 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMEJIAPC_00090 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
CITED
Taq-exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WGM37196
LinkDB
All DBs
Position
100542..103370
Genome browser
AA seq
942 aa
AA seq
DB search
MTQDGPPIRLYLVDGSAYIFRAYHALPPLTRKSDGLPVGAVAGFCNMLFKLLRDTREDAP
THFAVIFDHSEKTFRNQMYDLYKAHRPPPPEDLIPQFALVRDATRAFGVPGIELPGYEAD
DLIAAYACRVRELGGETIIVSSDKDLMQLVGDGVTMLDTMKNVRIGPDQVFEKFGVMPDK
VVDVQALCGDSVDNVPGAPGIGIKTAALLINEFGDLDTLLERAGEIKQDKRRQTLIDFAD
QIRLSRSLVQLDCNTPLPEPIADLTVRDADKDTLAAFLTEMGFNTLLRRIGVAAEGGGMA
PQPLPGFGKPPEAAPAPATPEPAAIEIDVSKYECVRDLETLDRWIAEAYEAGVIAFDTET
DALGSATAGLCGVSLATAPGRACYIPLTHEAVGGDLLTEAAPVDAQIDKATALARLKPLL
ESPAVLKVAQNAKYDIAVMALRGIDVAPIDDTMLISYVLEAGLHNHGMDELSELWLGHKP
IPFKQVAGTGKAQISFKHVQLNEATCYAAEDADVTLRLWHKLKPRLAREGMLTVYETLER
PLPPVIAAMENAGVKVDTDELRRLSHDFSLRMADFEAKAHEMLGRPFNMGSPKQIGEVLF
GELGLEGGKKTATGQWATDVDVLERLALQGAELPRLILDWRQLSKLKGTYTDNLIAAISP
KTGRIHTAYAMASTTTGRLSSSDPNLQNIPIRTEEGRKIRKAFVAEPGHLLISADYSQIE
LRLLAHVGDIPQLKSAFTQGLDIHAMTASEMFDTPIEGMPSEIRRRAKAINFGIVYGISA
FGLANQLSIPQGEAADYIKTYFRRFPGIGDYMEEMRAQVRQNGYVSTIFGRKIHIPDING
KSVGQRQFAERAAINAPLQGAAADIIRRAMARMPDALREAGLSSRMLLQVHDELVFEASE
AEAEATIAVAKRVMEGAPFPAVEISVPLVVEARAAKNWDEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggacggcccgccgatccggctctacctggtggatggttccgcctacatcttc
cgggcctatcacgccctgccgccgctgacccgcaagtcggacgggctgccggtcggggcc
gtggccggcttctgcaacatgctgttcaagctgctgcgtgacaccagggaagacgcgccc
acgcacttcgcggtgatcttcgaccattcggagaagaccttccgcaaccagatgtacgac
ctctacaaggcccaccggccgccgccgccggaggacctgattccgcagttcgccctggtc
cgcgacgccacccgcgccttcggcgtgcccggcatcgaactgcccggctacgaggccgac
gacctgatcgccgcctacgcctgccgggtgcgggagctgggcggcgagaccatcatcgtc
tcgtcggacaaggacctgatgcagctggtcggcgacggggtgaccatgctggacaccatg
aagaacgtccgcatcggccccgaccaggtgttcgagaagttcggcgtcatgcccgacaag
gtggtcgatgttcaggccctgtgcggcgacagcgtcgacaatgtgccgggcgcccccggc
atcggcatcaagaccgccgccctgctgatcaacgagttcggcgacctcgacacgcttctc
gaacgcgcgggagagatcaagcaggacaagcgccgccagaccctgatcgatttcgccgac
cagatccgcctgtcgcggtccctggtccagctcgactgcaatacgccgctgccggaaccg
atcgcggacctgaccgtccgcgacgccgacaaggacaccctggccgccttcctcacggag
atgggcttcaacaccctgcttcgccgcatcggcgtcgccgccgagggcggcggcatggcg
ccccagccgctgccgggtttcggcaagcctccggaagccgcgccggctcccgccacgccc
gagccggcggccatcgagatcgacgtcagcaagtacgagtgcgtccgcgacctcgagacc
ctcgaccgctggatcgccgaggcctacgaggccggcgtcatcgccttcgacaccgagacc
gatgcgcttggcagcgccaccgccggcctctgcggcgtgtccctggccaccgcccccggc
cgcgcctgctacatccccctgacccatgaggcggtcggcggcgacctgctgaccgaggcc
gccccggtcgatgcgcagatcgacaaggccacggccctggcccgcctgaaaccgctgctg
gaatccccggccgtgctgaaggtggcgcagaacgcaaagtacgacatcgcggtgatggcc
ctgcgcggcatcgacgtggcgccgatcgacgacaccatgctgatctcctacgtcctggag
gccggcctgcataaccacggcatggacgagctttccgagctctggctcggccacaagccg
atcccgttcaagcaggtggccgggaccggcaaggcgcagatcagcttcaagcatgtgcag
ctgaacgaggcgacctgctacgccgccgaggacgccgacgtcaccctgcggctctggcac
aagctcaagccccgcctggcccgcgagggcatgctgacggtctatgagaccctcgagcgg
cccctgccgccggtgatcgccgccatggagaacgccggggtcaaggtcgacaccgacgag
ctgcgccggctgtcccacgacttctccctgcgcatggccgacttcgaggccaaggctcat
gagatgctcggccggccgttcaacatgggcagccccaagcagatcggtgaggtgctgttc
ggagagcttggcctggagggtggcaagaagaccgccaccggccagtgggcgaccgacgtc
gatgtgctggaacgattggccctgcagggcgccgagctgccgcggctgatcctcgactgg
cgccagctgtcgaagctcaagggcacctataccgacaacctgatcgcggcgatttcgccc
aagaccgggcgcatccacaccgcctacgccatggcctcgacgacgacggggcgcctctcc
tcgtcggatcccaacctgcagaacatcccgatccgcaccgaggagggccgcaagatccgc
aaggccttcgtggccgagcccggccatttgctgatcagcgccgactacagccagatcgaa
ctgcgcctgctggcccacgtcggcgacatcccgcagctgaagagcgccttcacgcagggc
ctcgacatccatgccatgaccgcgtccgagatgttcgacacccccatcgagggcatgccg
tccgagatccgccgccgggccaaggccatcaacttcggcatcgtctacggcatcagcgcc
ttcggcttggccaaccaattgtcgatcccgcagggcgaggcggccgactatatcaagacc
tacttccgccgcttccccggcatcggcgactacatggaggagatgcgggcccaggtgcgc
cagaacggctatgtcagcaccatcttcggccgcaagatccatatccccgacatcaacggc
aagagcgtcggccagcgccagttcgccgagcgggcggccatcaacgccccgttgcagggc
gccgccgccgacatcattcgccgcgccatggcccgcatgccggacgccctgcgcgaggct
ggtctgtcatcgcgcatgctgctgcaggtgcacgatgaactggtcttcgaggccagcgaa
gccgaggcagaggcgaccatcgcggtcgccaagcgggtcatggagggcgcgcccttcccg
gcggtggagatcagcgtgccgctggtcgtcgaggcgcgggcggcgaagaactgggacgag
gcgcactag
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