Caulobacter sp. NIBR1757: AMEJIAPC_00249
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Entry
AMEJIAPC_00249 CDS
T10944
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMEJIAPC_00249 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caub03019
]
AMEJIAPC_00249 (pnp)
03016 Transfer RNA biogenesis [BR:
caub03016
]
AMEJIAPC_00249 (pnp)
Enzymes [BR:
caub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AMEJIAPC_00249 (pnp)
Messenger RNA biogenesis [BR:
caub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMEJIAPC_00249 (pnp)
Transfer RNA biogenesis [BR:
caub03016
]
Prokaryotic type
tRNA degradation factors
AMEJIAPC_00249 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
WGM37351
LinkDB
All DBs
Position
complement(247623..249758)
Genome browser
AA seq
711 aa
AA seq
DB search
MFEIRRKTIEWGGKSITLETGRIARQADGAVLATMGETVVLATAVFAKTQKPGQDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVCTVLQH
DLENDPDIIAMVAASAALVISGAPFMGPIAAARVAYVDGAYILNPTADELKGSKMDLVVA
GTADAVMMVESEIQELDEATVLGGIQFAHDGMQPVIQGIIDLAEHAAKDAFDFEPEDTDA
IKAAMKPLVGEDIIAGYKIQKKQDRYEAIGAAKKKAIAALAKSEANPDGHDPLKLAGVFK
ELEADVVRRAILDTGIRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQALVVATLGT
GDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPMLPAK
EDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLIRPVSGIAMGLILESDGFAVL
SDILGDEDHLGDMDFKVAGTSDGITSLQMDIKISGITIEIMKQALAQAKEGRDHILGEMN
KAMDAPREELGEYAPKIETMKIAADKIREVIGTGGKVIREIVATTGAKVDIGDDGTIKIA
ASEQSKIDAARDWIKSIASEPEVGAIYNGKVVKVVDFGAFVNFFGAKDGLVHVSQISNER
VARPQDVLTEGQMVKVKLIGFDDRGKTKLSMKIVDQETGEDLSAKQEAADA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagattcgacgcaaaaccatcgagtggggcggcaagtccatcaccctcgaaacc
ggccgcatcgcccgtcaggctgatggcgccgttctggccaccatgggcgaaaccgtcgtc
ctggccaccgccgtcttcgccaagacgcaaaagcccggccaggacttcttccccctgacc
gtcaactatcaggaaaagaccttcgcggccggcaagatccccggcggcttcttcaagcgc
gaaggccgtccgtcggaaaaggagacgctcgtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgaagtccaggtcgtctgcaccgtgctgcagcat
gacctcgagaacgatcccgacatcatcgccatggtcgccgcctcggccgccctggtgatc
tccggcgcccccttcatgggcccgatcgccgccgcccgcgtcgcctatgtcgatggtgcc
tacatcctgaacccgaccgccgacgagctgaagggctcgaagatggacctcgtcgtggcc
ggcaccgccgacgccgtgatgatggtcgagtcggaaatccaggaactggacgaagccacc
gttctgggcggcatccagttcgcgcacgacggcatgcagccggtcatccagggcatcatc
gacctggccgagcacgccgccaaggacgccttcgattttgagccggaagacaccgacgcc
atcaaggcggcgatgaagccgctggtcggcgaagacatcatcgccggctacaagatccag
aagaagcaggaccgctacgaagcgatcggcgccgccaagaagaaggccatcgccgccctc
gccaagagcgaagccaatccggacggccatgacccgctgaagctggccggcgtgttcaag
gaactggaagccgacgtcgtgcggcgcgccatcctcgacaccggcatccgcatcgacggc
cgtgacgtgaagaccgtgcgtccgatcctcggtgaagtcggcatcctgccgcgcacccac
ggctcggccctgttcacccgcggcgagacgcaggccctggtggtcgcgaccctcggcacc
ggcgacgacgagcagttcatcgacgccctggaaggcacctacaaggaaagcttcctgctg
cactacaacttccctccctactcggtcggtgagaccggtcggatgggcagccccggccgc
cgcgaaatcggccacggcaagctggcctggcgcgccctgcgcccgatgctgccggccaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccaccgtctgtggttcctcgctggccatgatggacgcgggcgttccgctgatc
cgtccggtctcgggcatcgccatgggcctgatcctggaaagcgacggcttcgccgttctg
tccgacatcctgggcgacgaagatcacctcggcgacatggacttcaaggtggccggcacc
agcgatggcatcacctcgctgcagatggacatcaagatctccgggatcaccatcgagatc
atgaagcaggccctcgcccaggcgaaggaaggccgtgatcacatcctcggcgaaatgaac
aaggccatggacgcgccccgcgaagagctgggcgagtacgcgccgaagatcgagactatg
aagatcgccgcggacaagatccgtgaagtgatcggcaccggcggcaaggtgatccgcgag
atcgtcgccaccaccggcgccaaggtcgacatcggggacgacggcacgatcaagatcgct
gcttccgagcagtccaagatcgacgccgcccgcgactggatcaagtcgatcgcttccgaa
ccggaagtcggcgcgatctacaacggcaaggtcgtcaaggtcgtcgacttcggcgccttc
gtgaacttcttcggcgccaaggacggcctcgtccacgtcagccagatcagcaacgaacgc
gtggctcgcccgcaggacgtgctgaccgaaggccagatggtcaaggtcaagctcatcggc
ttcgacgatcgcggcaagaccaagctgtcgatgaagatcgtcgaccaggaaaccggcgaa
gacctgtcggccaagcaggaagccgccgacgcgtaa
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