Caulobacter sp. NIBR1757: AMEJIAPC_00251
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Entry
AMEJIAPC_00251 CDS
T10944
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caub Caulobacter sp. NIBR1757
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caub03016
]
AMEJIAPC_00251 (truB)
Enzymes [BR:
caub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMEJIAPC_00251 (truB)
Transfer RNA biogenesis [BR:
caub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMEJIAPC_00251 (truB)
Prokaryotic type
AMEJIAPC_00251 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WGM37353
LinkDB
All DBs
Position
complement(250282..251214)
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AA seq
310 aa
AA seq
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MARRKKGLPVSGWVNLDKPYDFGSTQAVGKVRWLYTAQKAGHAGTLDPLATGILPIALGE
ATKTVSFLVDADKTYRFTLEWGRTTATFDREGATTAESDVRPTRDEVQAQLSQFIGEVTQ
IPPNYSAIKVDGERAYDLARAGEDFELAGRQVTIHDLRIVDVPDADHITLEMDCGKGTYV
RAVARDLAVALGACAHVSALRRTRVGPFGEETAITLEMLENLGHKAALPEALLPVSTALD
DIPALAVTAEDAFRLAQGRSIVLLPRQVEALRDQLTGGSRTVCAMDGERLVALAEMRAGS
LNPVRVFQLT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgccgcaagaagggcctgccggtcagcggctgggtcaatctcgacaagccctac
gacttcggctcgacgcaggcggtcggcaaggtccgctggctctacaccgcccagaaggcg
ggccacgccggcacgctcgatcccctggccaccggcatcctgccgatcgcgctgggcgag
gcgaccaagaccgtcagcttcctggtcgatgccgacaagacctaccgcttcacactcgaa
tggggccgcaccaccgccaccttcgaccgcgagggcgcgaccaccgccgagtccgacgtc
cgcccgacccgcgacgaggtccaggcccagctatcgcagttcatcggcgaggtcacccag
atcccgcccaactactcggccatcaaggtcgatggcgagcgggcctacgatctggcccgg
gctggagaggacttcgaactcgccggccggcaggtgaccatccacgatctgcgcatcgtc
gatgtccccgatgcggaccacatcaccctggaaatggactgcggcaagggcacctacgtc
cgcgccgtggcccgcgatctggccgtcgcgctcggggcctgcgcccatgtcagcgcgctt
cgccgcacgcgggttggcccgtttggggaagaaaccgcgataacactggaaatgttggaa
aatttaggccataaggccgcgcttccggaggctctccttccggtctcgaccgcgctggac
gacatcccggcgctggccgttaccgccgaagacgcattccggttggctcagggacgatcc
atcgtcctccttccgcgacaggtggaagccttgcgtgaccagcttacgggcgggtcgcgg
acggtttgcgcgatggacggagagaggctcgtggccctggccgagatgcgtgcgggatcg
ctcaatccggtgcgtgtttttcaactcacctga
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