Caulobacter sp. NIBR1757: AMEJIAPC_01738
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Entry
AMEJIAPC_01738 CDS
T10944
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMEJIAPC_01738 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caub03021
]
AMEJIAPC_01738 (rpoA)
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_01738 (rpoA)
Enzymes [BR:
caub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMEJIAPC_01738 (rpoA)
Transcription machinery [BR:
caub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMEJIAPC_01738 (rpoA)
DNA repair and recombination proteins [BR:
caub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMEJIAPC_01738 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
WGM38831
LinkDB
All DBs
Position
1792473..1793489
Genome browser
AA seq
338 aa
AA seq
DB search
MIERNWNELIRPEKPLIETGSDANRKARLVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AVQIDGVVHEFSSMEGVREDVVDVVLNIKQLALRMHSEGPKRMTLKATGPGAVTASQIEV
PSDIEILNGDHVLCTLDEGASVRMEFTVNNGKGYVPADKNRPEDAPIGLIAVDSLYSPVK
RVAYRVEPTRQGQSLDYDKLVLEVETNGAVSPVDAVAYAARIIQDQLQIFITFEEPKAKS
DGEAKPDLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMNLHLGMDVPNWPPENIDDLAKKFEDQI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacgcaattggaacgagctgatccgcccggagaagccgctgatcgagaccggt
tccgacgctaaccgcaaggcgcgtctggtggccgagccgctcgagcgcggctttggggtg
acgctcggcaacgcgctgcggcgcgttcttctctcgtcgctgcaaggcgccgccgtcacc
gccgtccagatcgacggcgtggtccacgagttcagctcgatggaaggcgtccgcgaggac
gtcgtcgacgtcgtcctgaacatcaagcagctggccctccgcatgcactcggaaggcccc
aagcgcatgacgctgaaggccaccggccccggcgccgtgaccgccagccagatcgaagtc
ccctcggacatcgagatcctgaacggcgaccatgtgctctgcaccctggacgaaggcgcc
tcggtgcgcatggagttcacggtcaacaacggcaagggctacgtgccggccgacaagaac
cgcccggaagacgccccgatcggcctgatcgccgtcgacagcctctactcgccggtcaag
cgcgtcgcctaccgcgtcgagccgacccgccagggccagtcgctggactatgacaagctg
gttctggaagtcgaaaccaacggcgccgtgtcgccggtggacgcggtggcctacgccgcc
cgcatcatccaggatcaactgcagatcttcatcaccttcgaagagccgaaggccaagtcg
gatggcgaagccaagcccgacctgcccttcaacccggcgctcctcaagaaggtggacgag
ctggaactgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcc
ctcaacgagatcaaggaagtgctttcgggcatgaacctgcacctcggcatggacgtgccc
aactggccgccggaaaacatcgacgatctggcgaagaagttcgaagaccagatctaa
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