Caulobacter sp. NIBR1757: AMEJIAPC_02193
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Entry
AMEJIAPC_02193 CDS
T10944
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub00550
Peptidoglycan biosynthesis
caub01100
Metabolic pathways
caub01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMEJIAPC_02193 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AMEJIAPC_02193 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caub01011
]
AMEJIAPC_02193 (mrdA)
Enzymes [BR:
caub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AMEJIAPC_02193 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
caub01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AMEJIAPC_02193 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WGM39276
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All DBs
Position
2240695..2242752
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AA seq
685 aa
AA seq
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MSEPSIFFSEVNRRQGDFNRRAFLLGGITGLGLAALGTRLAYLQVVEAQRYQMLASSNQF
NFIMVPPPRGRVLDRNGVVLASNRPNFRLTVYRDTDTDVEKVVANLAQLVPIDPARIPRL
IKDIKRAPKKAPVPVMEDLTWEQFTRINVRAPELPGVSADMAEVRVYPYGGAFAHVIGYV
AKVNDKDIKKIKDAGQQPDPLLYNPGFRIGRQGVEKAFDLQLRGKAGGKKVEVDAKGRVV
AEDPGGDLPAVPGDEIKLTLDVDVQRRALEVFGEESGAAVLMDCRTGDILCMASTPSFDA
NGFVRGLSGPEYRALANYERKPLLDKALSGTYPAGSTFKPTTALAFLAAGINPKERVVCT
GGYHYGNRTFRCWKAGGHGAQDMHDAIKNSCDVYFYHLCNRAGIDLISETAKKLGFQTEF
DIGIPGQKKGLIPSKAWKREAYAKNPNPDARVWHLGETLSVAIGQGAITVNCLQLAVATA
RIANGRKALEPRLIKSVGGKELPSGAAVPDLPIPKEHLDIVRAGMAAVANDTSGGAYRQS
QLGLGDVLMAGKTGTAQSRDYKAGESRKNAGLAWSKKDHNLFIAFAPVDNPRYALAVIVQ
HGGVSGALAAAPRAREIMRTALLKDPEIRARIEQPLPLPELDPDATVEGAEPDLPTEGLA
PLATPPDSPAVVPPPTAAVPGGPGR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagccgtcgatcttcttcagcgaggtcaatcgccgccagggcgacttcaaccgg
cgcgccttcctgctcggcggcatcaccggcctgggtctggcggcgctcggcacgcggctg
gcctatctgcaggtggtcgaggcccagcgctaccagatgctggccagctccaaccagttc
aacttcatcatggtgccgccgccgcgcggacgggtcctggaccgcaacggggtggtgctg
gcctcgaaccgccccaacttccggctgaccgtctatcgcgacaccgacaccgacgtcgaa
aaggtggtcgccaacctggcccagctggtgcccatcgacccggccaggatccccaggctg
atcaaggacatcaaacgcgcgccgaagaaggccccggtgccggtcatggaagacctgacc
tgggagcagttcacccgcatcaacgtccgcgccccggaactgccgggcgtttcggccgac
atggccgaggtccgcgtctacccctacggcggcgccttcgcccacgtcatcggctatgtg
gccaaggtcaacgacaaggacatcaagaagatcaaggacgccgggcagcagccggacccg
ctgctctacaaccccggcttccgcatcggccgccagggcgtcgagaaggccttcgacctg
cagctgcgtggcaaggccggcggcaagaaggtcgaggtcgacgccaagggccgcgtcgtg
gccgaagacccgggcggcgacctgccggccgtgccgggcgacgagatcaagctgacgctc
gatgtcgatgtgcagcgccgggccctggaagtgttcggcgaggagagcggcgcggccgtt
ctgatggactgccgcacgggcgatatcctgtgcatggcgtcgacgccgtcgttcgacgcc
aacggttttgtccgggggctgtccggaccggaataccgggctctggcgaactacgaacgc
aagccgctgctcgacaaggcgctgtccggcacctacccggccgggtccaccttcaagccg
acgacggcgttggcgtttctggcggcgggcatcaacccgaaggagcgagtagtttgcacg
ggtggctaccactacggcaaccgcaccttccggtgctggaaggccggagggcatggcgcg
caggacatgcacgacgccatcaagaactcgtgcgatgtctacttctaccacctgtgcaac
cgggccggcatcgacctgatctcggagacggccaagaagctggggttccagaccgagttc
gacatcggcatccccggccaaaagaagggtctgatccccagcaaggcctggaagcgggaa
gcctacgcgaagaaccccaaccccgacgcaagagtctggcatctgggtgaaacgctatcc
gtggcgatcgggcagggggccatcacggtcaactgcctgcaactggccgtcgcgacagcc
cgtatcgccaacgggcggaaggcgttggaaccgcggctgataaagtcggtcggcggcaag
gagttgccgtcgggcgctgcggtacccgacctgccgatcccgaaggaacacctcgacatc
gtccgcgccggcatggccgccgtggccaacgacaccagcggcggcgcctatcgccagagc
cagctgggccttggcgacgtgctgatggccggcaagaccggcaccgcccagtcgcgggac
tacaaggccggggagtcgcgcaagaacgccggcctggcctggtcgaagaaggaccacaac
ctgttcatcgccttcgcgccggtggacaatccccgctacgccctggccgtcatcgttcag
cacggcggcgtcagcggcgccctggcggccgcgccgcgcgcccgtgaaatcatgcgcacg
gccctgctcaaggacccggaaatccgggcccggatcgagcagcccctgccgctgccggaa
ctcgaccccgacgccaccgtcgaaggcgccgagcccgacctgccgaccgaggggctggcc
ccgctggcgacgccgcccgacagcccggccgtggtcccgccgccgaccgccgccgttcct
ggaggccccggccgatga
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