Caulobacter sp. NIBR1757: AMEJIAPC_02523
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Entry
AMEJIAPC_02523 CDS
T10944
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
caub Caulobacter sp. NIBR1757
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caub03032
]
AMEJIAPC_02523 (topA)
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_02523 (topA)
Enzymes [BR:
caub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMEJIAPC_02523 (topA)
DNA replication proteins [BR:
caub03032
]
Prokaryotic type
DNA Topoisomerases
AMEJIAPC_02523 (topA)
DNA repair and recombination proteins [BR:
caub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMEJIAPC_02523 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WGM39598
LinkDB
All DBs
Position
2565921..2568623
Genome browser
AA seq
900 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGPGFTVLASYGHVRDLPSKDGSVKPDEDFAMFWEVDAKSTK
RISDIADALKGADGIILATDPDREGEAISWHVLEILQKKKAIKDKAVSRVTFNAITKTAV
LDAMANPRQIDMELVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLVVDR
EIEIEKFRTQEYWSVDAEVTAGGDPFTARLVKHENKKLTKFDLGDEATAHKARDAVSAAA
FSVHSVEKKPARRSPPPPFTTSTLQQEASRKLGFNAQRTMQAAQKLYEGIDIGGETVGLI
TYMRTDGVQAAPEALTEARDVIAGLYGKDYVPESARIYKTKAKNAQEAHEAIRPTSLNRN
PGKLRLDGDLGRLYELIWKRMIASQMEAARIERTTIELESGDGQTGLRATGQVIQFPGYL
AVYEEGRDDAEDEDGARLPPVNEGAAARVLNVKADQHFTEPPPRYSEASLVKKMEELGIG
RPSTYASILTVLRDRAYVKMEKNRFIPEDKGRLVTAFLEQFFARYVEYDFTAGLEEKLDL
VSDGKLNWKALLREFWTDFHAAADDIGELRVSQVLDALNESLGPHIFPQKEDGSDPRLCT
TCGTGRLSLKTGKYGAFIGCSNYPECRFTRPIAQSEGDGDAAETADRELGVNPKTMQAVW
LKNGRFGPYVEEAGEKPKRASLPKGWLPAAMDIDKALRLLELPRDVGAHPEDGKMIQAGI
GRYGPYVLHEGTYANLESADEVFDVGLNRAVAVLAEKRAGGRGARGQAAALKELGNHPED
GAPIKILSGRFGPYIKHGSTNANVPRGKDPLEVTLEEAVGLIAERVAKGGGKKPVKKAAA
KKPAAAKKTGDKPPAKNPAEKRIASKEVVAKKKAAVKKPTAASLGVTKVVGKKKPAAKKD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcgtcgtcgagagcccggccaaggccaagaccatcaacaagtatctggga
cccgggttcaccgttctggcgtcctatggccacgtccgcgacctgccgtcgaaggacggg
tcggtgaagccggatgaggacttcgcgatgttctgggaggtggacgccaagtccaccaag
cgcatcagcgacatcgccgacgccctgaagggcgccgacggcatcatcctggccaccgac
ccggatcgcgagggcgaggccatcagctggcacgtgctggagatcctgcagaagaagaag
gcgatcaaggacaaggccgtcagccgcgtcaccttcaacgccatcaccaagaccgccgtg
ctcgacgccatggccaacccgcgccagatcgacatggagctggtcgacgcctatctcgcc
cgccgggcgctggactatctggtcggcttcaccctgtcgccggtgctgtggcgcaagctg
ccgggctcgcgctcggccggccgggtgcagtcggtggccctgcggctggtcgtcgatcgc
gagatcgagatcgagaagttccgcacccaggaatactggagcgtcgatgccgaggtgacc
gccggcggcgatcccttcaccgcccgcctcgtcaagcacgagaacaagaagctcaccaag
ttcgacctcggcgacgaggcgacggcgcacaaggcgcgcgacgccgtctcggccgccgcc
ttcagcgtccactcggtcgagaagaagccggcccggcgcagcccgccgccgcccttcacc
acctcgaccctgcagcaggaggccagccgcaagctcggcttcaacgcccagcgcaccatg
caggcggcccagaagctgtacgagggcatcgatatcggcggcgagaccgtcggcctgatc
acctacatgcggaccgacggggtgcaggccgcgccggaagccctgaccgaggcgcgcgac
gtcatcgccggcctctatggcaaggactacgtccccgagagcgcccgcatctacaagacc
aaggccaagaacgcccaggaagcgcacgaagccatccggccgacctcgctgaaccgcaat
ccgggcaagctgcgcctggatggcgatctgggccgcctctacgagctgatctggaagcgg
atgatcgccagccagatggaagcggcccgcatcgagcgcaccaccatcgagctggaaagc
ggcgacggccagaccggcctgcgcgccaccggccaggtgatccagttccccggctacctc
gccgtctatgaagagggccgcgacgacgccgaggacgaggacggcgcccgcctgccgccc
gtcaacgagggcgccgccgcccgggtgctcaacgtcaaggccgaccagcacttcaccgaa
ccgccgccgcgctattcggaagccagcctggtcaagaagatggaagagctcggcatcggc
cggccctcgacctatgcctcgatcctgaccgtgctgcgcgaccgcgcctatgtgaagatg
gagaagaaccgcttcatcccggaagacaagggacggctggtcaccgccttcctcgaacag
ttcttcgcccgctacgtggaatacgatttcaccgccggcctcgaagagaagctcgacctg
gtcagcgacggcaagctgaactggaaggcgctgctgcgcgagttctggaccgacttccac
gccgccgccgacgacatcggcgagctgcgggtcagccaggtgctcgacgccctcaacgaa
agccttgggccccacatcttcccgcagaaggaagacggctccgacccgcgtctctgcacg
acctgcggcaccggccgcctgtcgctgaagaccggcaagtacggcgccttcatcggctgt
tccaactatcccgaatgccgcttcacccggcccatcgcccagtccgagggcgacggcgac
gcagccgagaccgccgaccgcgagctgggggtcaatcccaagaccatgcaggcggtgtgg
ctgaagaacggccgcttcggtccctatgtcgaggaagccggcgagaagcccaagcgcgcc
agcctgcccaagggctggctgcccgcggcgatggatatcgacaaggccctgcgcctgctg
gagctgccgcgcgatgtcggggcgcaccccgaggacggcaagatgatccaggccggcatc
ggccggtacgggccctacgtcctgcacgagggcacctacgccaacctggagagcgcggac
gaggtgttcgacgtgggcctcaaccgcgccgtggcggtgctggccgagaagcgggccggc
ggacgcggcgcacgcggccaggcggcggccttgaaggaactgggcaatcacccggaagac
ggcgcgccgatcaagatcctgtcgggccgcttcgggccctacatcaagcacggctcgacc
aacgccaacgtgccgcgcggcaaggacccgctggaggtcaccctcgaggaagccgtcggc
ctgatcgccgagcgggtggccaagggcggcggcaagaagccggtgaagaaggcggcggcg
aaaaagcccgcggccgccaagaagacgggcgacaagccgccagccaagaacccggccgaa
aagcgcatcgccagcaaggaagtggtcgccaagaaaaaggcggcggtcaagaaaccgacg
gccgcctcgctgggcgtgaccaaggtggtggggaagaagaagccggcggcgaagaaggac
tga
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