Caulobacter sp. NIBR1757: AMEJIAPC_02680
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Entry
AMEJIAPC_02680 CDS
T10944
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03420
Nucleotide excision repair
caub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMEJIAPC_02680 (uvrD)
03430 Mismatch repair
AMEJIAPC_02680 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_02680 (uvrD)
Enzymes [BR:
caub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMEJIAPC_02680 (uvrD)
DNA repair and recombination proteins [BR:
caub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMEJIAPC_02680 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AMEJIAPC_02680 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_25
AAA_11
COPS2_C
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
WGM39753
LinkDB
All DBs
Position
2729751..2732093
Genome browser
AA seq
780 aa
AA seq
DB search
MPESPNDPLAPRISDLARADRAPGQPDYLHGLNPEQRQAVEATEGPVLVLAGAGTGKTRV
LTTRLAHILATGRARPWELLAVTFTNKAAREMRERIAAIIGPSAEGLRWLGTFHSVAAQI
LRRHADLVGLKSSYTILDTDDQERLIKQVIEAADIDAKRWTPKTLAGLIDHWKNRGWTPE
NLPSPENSAFANNRGQELYAAYQARLRTLNACDFGDLLLHNITIFQKHPDILAEYHDRFR
YILVDEYQDTNVAQYLWLRLLGQARQNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGAA
VIRLERNYRSTRNILAAASGLIAENKGRLGKTLWTEDQAGEKVMVRGVWDGEAESRLIAE
EIERWKKSGRRYRDVAILVRASFQMRAFEERFVMLAIPYKVIGGPRFFERAEIRDAHAYL
RLIQSPDDDLAFERIVNVPKRGIGDTSVQKILTLARHHGISAIDASRGLVNTDELVGKTR
TALASFVRDIDRWTAQLQSGQTDHVRLTETILEESGYTDALRLDKGPTSQTRLENLKELV
QSMGQFDALGDYLEHVSLVMDLDRGGGDNDSVQIMTLHSAKGLEFPLVFLPGWEEGVFPS
QRSMDEKGEKGLEEERRLAYVGITRAREQARISFAANRQVYGRWTTQLPSRFVDELPPET
VDAASETGYYGGGPGMSQPTTSRWDADSSFGQGYTSPGWKRAQARSYQGSHPGRQQVIEG
EGRLVAVSAPEKESAYAKGDRVFHIKFGYGAVVAVEGNKLTVAFEQAGEKKVIDSFVERG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatctcccaacgaccccctcgctcccaggatctccgacctcgcccgcgccgat
cgcgcgcccggccagcccgactacctgcacggcctcaaccccgagcagcgccaggccgtg
gaagccaccgaaggccccgtcctcgtcctggccggcgccggcaccggcaagacgcgcgtg
ctgaccacccgcctggcccacatcctggccaccggccgcgcccgcccgtgggagctgctc
gccgtcaccttcaccaacaaggccgctcgcgagatgcgcgagcggatcgccgccatcatc
ggccccagcgccgagggcctgcgctggctgggcaccttccacagcgtagccgcccagatc
ctgcgccgccatgccgatctggtgggcctgaaatccagctacaccatcctcgacaccgac
gatcaggaacggctgatcaaacaggtcatcgaagccgccgacatcgacgccaagcgctgg
acgccgaaaaccctcgccggcctgatcgaccactggaagaaccgcggctggacgcccgaa
aacctgccctccccggaaaacagcgctttcgccaacaaccgcggccaggagctctacgcc
gcctaccaggcccgcctgcgcacgcttaacgcctgcgacttcggcgacctgctgctgcac
aacatcaccatattccagaagcacccggacatcctggccgagtaccacgaccgcttccgt
tacatcctcgtcgacgagtaccaggacaccaacgtcgcccagtacctgtggctgcggctg
ctcggccaggcccgccagaacgtctgctgcgtcggcgacgacgaccagtcgatctacggc
tggcgcggggccgaggtcgacaacatcctgcgcttcgagcgcgacttcccgggcgccgcc
gtcatccggctggagcgcaactaccgctcgacccgcaacatcctggccgccgccagcggc
ctgatcgccgagaacaagggccgccttggcaagaccctgtggaccgaggaccaggccggc
gaaaaggtcatggtccgcggcgtctgggacggcgaggccgagagccgcctgatcgcagag
gagatcgagcgctggaagaagtccggccggcgctatcgggacgtcgccatcctggtgcgc
gcctccttccagatgcgcgccttcgaagagcgcttcgtcatgctggccatcccctacaag
gtgatcggcggcccccgcttcttcgagcgggccgaaatccgcgacgcccatgcctacctg
cgcctgatccagtcgcccgacgacgacctggccttcgagcgcatcgtcaatgtgcccaag
cgcggcatcggcgacaccagcgtccagaagatcctcaccctggcccgccaccacgggatc
agcgccatcgacgccagccgaggcctcgtcaacaccgacgaactggtcggcaagacccgc
acggccctcgcctctttcgtccgcgacatcgaccgctggaccgcccagctgcagagcggc
cagaccgaccacgtccgcctgaccgagaccatcctggaggagagcggctacaccgacgcc
ctgcgcctcgacaaaggcccgaccagccagacccggctggaaaacctcaaggagctggtc
cagtcgatgggccagttcgacgccctcggcgactatctcgagcacgtctccctggtcatg
gacctcgaccggggcggcggcgacaacgacagcgtccagatcatgaccctgcacagcgcc
aagggcctggaattccccctggtcttcctgcccggctgggaggaaggcgtcttccccagc
cagcgcagcatggacgagaagggcgagaagggcctggaggaggaacggcgcctcgcctac
gtcggcatcacccgcgcccgcgaacaggcccgcatcagcttcgccgccaaccgccaggtc
tacggccgctggaccacccagctccccagccgcttcgtcgatgaactgccgccggagacg
gtcgatgcggcgtccgagacgggctactacggcggcggccccggcatgagccagcccacc
accagccgctgggacgccgactccagcttcggccagggctacacctcccccggctggaaa
cgcgcccaggcgaggagctaccagggcagccaccccggccgccaacaggtcatcgaaggc
gaaggccgcctggtggcggtgtcagcgcccgagaaggagagcgcctacgcgaagggggac
cgggtgttccacatcaagttcggctacggcgcggtcgtggccgtggaggggaacaagctg
acggtggcgttcgagcaggcgggggagaagaaggtgatcgactcgttcgtggagcggggg
tga
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