Caulobacter sp. NIBR1757: AMEJIAPC_04013
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Entry
AMEJIAPC_04013 CDS
T10944
Symbol
ldc
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub00330
Arginine and proline metabolism
caub00480
Glutathione metabolism
caub01100
Metabolic pathways
caub01110
Biosynthesis of secondary metabolites
caub04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AMEJIAPC_04013 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AMEJIAPC_04013 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AMEJIAPC_04013 (ldc)
Enzymes [BR:
caub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AMEJIAPC_04013 (ldc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NitrOD5
Motif
Other DBs
NCBI-ProteinID:
WGM41065
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Position
4226006..4227256
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AA seq
416 aa
AA seq
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MHTYHTPLDLVRERSPEHPVALVRRDAVAAAARWFQTKFKGDVLYAVKANPSPWVIETLV
QNGVTRFDVASIPEIALVAEHAPGSQMAFMHPVKSRRSISQAYFDYGVRTFALDTHEELA
KILDATGGARDLNLIVRMAVDAEGANFSLSGKFGVTPFEAPSLLLAARQATSALMGVSFH
VGSQCMRPTAYQAAMAQVSRSLIRAGVFADVVDVGGGFPSIYPGMIPPDMDDYFSAIERG
FNEMPVSETTELWCEPGRALVAESTSLLTRVELRKGEALYLNDGSYGSLFDAAHVKWPFP
VKLYRGEGAEAREVEGDLKPFRFYGPTCDSMDHMPGPFYLPTDIQEGDFIEIGMLGAYGV
AMTTRFNGFGETEMVEVTDAPMASMFGLARRSIPAPKPASNVVRLSRPKGRKRRRK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgcacacgtaccatactcccctggacctggtccgcgagcggtctccggaacatcctgtc
gcactcgtgcgacgcgatgccgtagctgcagcagcgcgctggttccagacgaagttcaag
ggtgacgtcctctacgctgtgaaggccaatccttcaccgtgggtcatagagacgctcgtc
cagaatggtgtgacccggttcgacgtcgcgtcgatcccggaaatcgcgcttgtggcggag
cacgccccgggctcgcagatggccttcatgcatcccgtgaagagccgtcggtcgatctcg
caggcctacttcgactacggcgtgcgcaccttcgcgctcgacacccatgaagagctggcc
aagatcctcgacgccaccggcggggcgcgcgacctgaacctcatcgtccgcatggcggtc
gatgcggagggcgccaacttcagcctgtcgggcaagttcggggtcaccccgttcgaagcc
cccagcctgctgctggccgcgcgtcaggcgaccagcgccctgatgggcgtcagcttccat
gtcggcagccagtgcatgcgcccgaccgcctatcaggcggccatggcgcaggtcagccgc
agcctgatccgcgccggcgtcttcgccgatgtggtcgatgtcggcggcggcttcccgagc
atctatcccggcatgatccctccggacatggacgactatttcagcgccatcgaacgcggc
ttcaacgagatgccggtgtccgagacgaccgagctgtggtgcgaacccggccgggccctc
gtcgccgagtcgacctcgctgctgacccgggtcgagctgcgcaagggcgaggcgctgtac
ctcaacgacgggtcctacggctcgctgttcgacgcggcgcacgtcaaatggcccttcccg
gtcaagctctaccggggcgaaggcgcggaggcccgtgaagtcgagggcgacctgaagccg
ttccgcttctacggtccgacctgcgattccatggaccacatgccgggtcccttctacctg
cccaccgatatccaggaaggcgacttcatcgagatcggcatgctgggcgcctacggggtc
gccatgaccacccgcttcaacgggtttggcgagaccgagatggtggaagtgaccgacgcc
ccgatggcctcgatgttcggtctggcccgtcgctcgatcccggcccccaagccggccagc
aacgtcgtcaggctgtcacgccccaagggcaggaaacgtcggcgcaagtaa
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