Caulobacter sp. NIBR1757: AMEJIAPC_04191
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Entry
AMEJIAPC_04191 CDS
T10944
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
caub Caulobacter sp. NIBR1757
Pathway
caub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMEJIAPC_04191 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caub03019
]
AMEJIAPC_04191 (recQ)
03400 DNA repair and recombination proteins [BR:
caub03400
]
AMEJIAPC_04191 (recQ)
Enzymes [BR:
caub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMEJIAPC_04191 (recQ)
Messenger RNA biogenesis [BR:
caub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMEJIAPC_04191 (recQ)
DNA repair and recombination proteins [BR:
caub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMEJIAPC_04191 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RQC
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WGM41240
LinkDB
All DBs
Position
4419206..4421098
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AA seq
630 aa
AA seq
DB search
MPPSLALSAPASASAWHKALVTDSPTLDTARETLRRVFGHAEFRGLQADVIEEVLAGRNV
VAVLPTGGGKSVCYQIPAMIRPGLGLVISPLIALMSDQVASLRQSGVAAARLDSNIAPFE
RQEIWESIERGELDLLYISPEGLSSGNMLERLARLPLSLIAIDEAHCVSQWGHDFRPDYR
LLGRLAERFPGVPRMAVTATADARTREDIRNQLSLQDAAEFVDSFARPELSLNAERKIGS
GHKRVLELVAQRPGKSGVVYVGSRDGADELAGKLREAGAPALAYHAGLEKDLRGRRLEQF
LEADAAVMVATIAFGMGVDKPDVRYVIHADPPASIEAYWQEIGRAGRDGQPADGITLYSS
ADMAWAFRRLESRDMAAEVKQVQARKIRQFYGMMEGTACRAAAVRRYFGEEKVERCGQCD
LCLAPPESIDVTQSASKALAATHRLGGRFGRGRLVDHLLGKTKDVSDFEAGLSTWGIGTE
LSQHAWRDLIDQLLFEGLLKEDPNDGRPLIGLGDIDGVRGVWKSERTVLIRKDSTRAAAA
GKTRASKGGKNALATLTAGDQPLFEALRAWRRDEAQRQHVPPYVIFHDATLAEIAMRKPS
SLPALAAVSGVGEGKLERYGDAVLAVVRAG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccagcctcgccctttccgctcccgcttccgccagcgcatggcataaggcgctg
gtgaccgattctccgaccctcgacaccgcccgcgagaccctgcgccgggtctttggccat
gccgagttcagggggcttcaggccgacgtcatcgaggaggtgctggccggccgcaacgtc
gtcgccgtgctgccgaccggcggcggcaagagcgtctgctatcagatcccggcgatgatc
cggccgggcctgggcctggtcatctcgccgctgatcgccctgatgagcgaccaggtggcg
agcctgcgccagtccggcgtggcggcggcgcggctcgattccaacatcgcgccgttcgag
cgtcaggagatctgggagagcatcgagcgcggagagctggacctgctctacatctcgccc
gaaggcctctcgtccggcaacatgctggagcgcctggcccgcctgccgctgtccctgatc
gccatcgacgaagcccactgcgtcagccagtggggccatgacttccgcccggactaccgg
ctgctggggcggctggcggaacgcttccccggcgtgccgcgcatggcggtcaccgccacc
gccgacgcccgtacgcgcgaggacatccgcaatcagctcagcctgcaggacgccgccgag
ttcgtcgacagcttcgcgcggccggaactgtcgctgaacgccgagcgcaagatcgggtcg
ggccacaagcgggtcctggaactggtcgcccagcggccgggcaagtcgggcgtggtctat
gtcggcagccgcgacggcgccgatgaactggccggcaagctgcgcgaggccggggcgccg
gccctggcctatcacgcgggcctcgagaaggatctgcgcggccggcggctggagcagttc
ctcgaggccgacgcggcggtgatggtggcgaccatcgccttcggcatgggcgtcgacaag
cccgacgtccgctatgtcatccacgccgacccgccggccagcatcgaggcctactggcag
gagatcggccgggccggccgcgacggtcagcccgccgacggcatcaccctctactccagc
gccgacatggcctgggccttccgtcggctggaaagccgcgacatggccgccgaggtcaag
caggtccaggcccgcaagatccgccagttctacggcatgatggagggcacggcctgccgg
gcggcggcggtgcggcgctatttcggcgaggagaaggtcgagcgctgcggacagtgcgac
ctgtgcctggcgccgccggagagtatcgacgtcacccagtcggcgtcgaaggcgctggcg
gcgacgcatagactgggcggccggtttgggcgcggccggctggtcgaccacctgctcggc
aagaccaaggatgtctcggatttcgaggccgggctgtcgacctgggggatcgggacggag
ctgagccaacacgcctggcgggacctgatcgaccagctgctgttcgaggggctgctgaag
gaagaccccaatgacgggcggccgttgatcggtctgggcgacatcgacggcgttcgaggg
gtgtggaagtccgaacgcacggtgctgatccgcaaggactcgacccgggcggcggcggcc
gggaagacgcgggcgagcaagggggggaagaatgcgctggcgacgttgacggcgggcgac
cagccgctgttcgaagccctgcgcgcctggcgccgcgatgaggcacagaggcagcatgtg
ccgccctatgtgatcttccatgatgcgacgcttgctgaaatcgccatgcgcaaaccgtcc
agcctgccggccctggccgccgtcagcggggtcggcgagggcaagctggagcgctatggc
gacgcggtcttggccgtggtgcgcgccgggtag
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