Caulobacter sp. ErkDOM-YI: ACN2C6_05585
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Entry
ACN2C6_05585 CDS
T11755
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
caue Caulobacter sp. ErkDOM-YI
Pathway
caue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACN2C6_05585 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caue03400
]
ACN2C6_05585 (xth)
Enzymes [BR:
caue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACN2C6_05585 (xth)
DNA repair and recombination proteins [BR:
caue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACN2C6_05585 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF1654
Motif
Other DBs
NCBI-ProteinID:
XPR14029
LinkDB
All DBs
Position
complement(1157882..1158670)
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AA seq
262 aa
AA seq
DB search
MRIATWNVNSVNARLEGVLAWFEAEAPDVAVLQEIKCIDEKFPTEAFERLGYNVAVHGQK
TYNGVALLSKFPLEDVRRGLPFLSDDETDEQARYIEAVIAAPTPVRVCGIYLPNGNPLGT
EKFDYKLAWMRRLHSHAKTLLALEEPLVILGDYNVIPEAEDVANPDAWAGDALFQPESRA
AFRALKNLGFSDAYMQVDGAPGGYTFWDYQAGAWPRNLGIRIDHLLLSPQASDRLVNVVI
HRDERDKEKPSDHVPVVAELSL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgccacctggaacgtgaattctgtgaatgctcgcctcgaaggggtgctggcc
tggttcgaagcggaggctccggacgtcgccgtgctgcaggaaatcaagtgcatcgacgag
aaatttccgacggaagcctttgaaaggcttggctataatgtcgccgtccacggccagaag
acctataatggcgtcgccctgctgtcgaaattcccgctagaggacgtccggcgcggcctg
cccttcctgagcgacgacgaaaccgacgagcaggcccgctatatcgaggccgtgatcgcc
gcgcccacgccggtgcgggtctgcggcatctatctgcccaacggcaacccgctgggcacc
gagaagttcgactacaagctggcgtggatgcgccgactgcacagccacgccaagaccctg
ctggcgctggaggagcccctggtcatcctgggcgactacaacgtcattcccgaggccgaa
gacgtcgccaatcccgacgcctgggccggcgacgccctgttccagcccgaaagccgggcc
gccttccgggccctgaagaacctgggcttttccgacgcctatatgcaggtcgacggcgcg
ccgggcggctacaccttctgggactatcaggccggcgcctggccgcgaaacctggggatc
cgcatcgaccacctgctgctgtcgccccaggccagcgaccggctggtcaatgtggtcatc
catcgcgacgagcgcgacaaggaaaagccatcggaccacgtcccggtggtggccgagctg
agcctgtag
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