Caulobacter sp. ErkDOM-YI: ACN2C6_17770
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Entry
ACN2C6_17770 CDS
T11755
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
caue Caulobacter sp. ErkDOM-YI
Pathway
caue00300
Lysine biosynthesis
caue00470
D-Amino acid metabolism
caue01100
Metabolic pathways
caue01110
Biosynthesis of secondary metabolites
caue01120
Microbial metabolism in diverse environments
caue01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
caue00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACN2C6_17770 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACN2C6_17770 (dapF)
Enzymes [BR:
caue01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACN2C6_17770 (dapF)
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Ortholog
Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XPR12764
LinkDB
All DBs
Position
complement(3667299..3668168)
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AA seq
289 aa
AA seq
DB search
MSRTFLKMNGLGNDFVVIETASQSFEPTPEEIRAIAKRPDAKGNEGGIGCDQVIAIDPPR
REGASAYVRFWNSDGDAVGACGNGTRCVAWLLMQSAGKDSVAFDTDGGRLSGQMAGDKRV
TVDMGQPGLDWTQIPLSEEMNTERVELQVGPIDAPLVHTPVCVSMGNPHVVFFVDAPVTD
AFATGTGSLVEHHPLFPQAVNVGFAHIAARDHIKLKVWERGAGLTLACGTGACAAQVAAV
RRGLTDRIATVEFESGSLVIEWREADGHVIMTGPITLEYTGKLPEKVAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaccttcctcaagatgaacggcctcggcaacgacttcgtcgtgatcgagacc
gccagccagtccttcgagcccacgcccgaggagatccgcgcgatcgccaaacgcccagat
gcgaagggtaatgagggcgggatcggctgtgaccaggtgatcgccatcgatccgcccagg
cgcgagggcgccagcgcctatgtccgcttctggaattccgacggcgacgcggtcggcgcc
tgcggcaacggcacgcgctgcgtggcctggctgctgatgcagtcggccggcaaggacagc
gtggccttcgacaccgacggcggacgcctgtcgggccagatggccggcgacaagcgggtg
acggtcgatatgggccagccgggcctggactggacccagatcccgctgtccgaagagatg
aacaccgagcgggtcgagctgcaggtcggccccatcgacgcgccgctggtccacacgccg
gtctgcgtctcgatgggcaatccgcatgtggtgttcttcgtcgacgcgccggtgaccgac
gccttcgccaccggcaccggctcgctggtcgagcatcacccgctgtttccgcaagccgtc
aatgtcggcttcgcccacatcgccgcccgcgatcacatcaagctgaaggtctgggaacgc
ggcgcgggactgaccctggcctgcggcaccggcgcctgcgccgcccaggtggccgccgtg
cgccggggcctgaccgaccgcatcgccaccgtcgagttcgagagcggtagcctggtcatc
gaatggcgcgaggccgacggccacgtgatcatgaccggcccgatcaccctggaatacacc
ggcaagctgccggagaaggtcgccgcatga
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