Caulobacter sp. FWC26: CSW63_04535
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Entry
CSW63_04535 CDS
T05901
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cauf
Caulobacter sp. FWC26
Pathway
cauf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cauf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSW63_04535 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cauf03021
]
CSW63_04535 (rpoC)
03400 DNA repair and recombination proteins [BR:
cauf03400
]
CSW63_04535 (rpoC)
Enzymes [BR:
cauf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSW63_04535 (rpoC)
Transcription machinery [BR:
cauf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSW63_04535 (rpoC)
DNA repair and recombination proteins [BR:
cauf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSW63_04535 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RnfC_N
2CompARG
ERp29
Motif
Other DBs
NCBI-ProteinID:
AZS19977
UniProt:
A0A3S9VBP1
LinkDB
All DBs
Position
611215..615405
Genome browser
AA seq
1396 aa
AA seq
DB search
MNQEVLNIFNPVQAAPTFDQIRISLASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIELASPVAHIWFLKS
LPSRIAMMLDMPLKDIERVLYFEYYIVTEPGLTPLKQHQLLSEDDYMRAQEEYGDDSFTA
EIGAEAIQNLLKAIDLEKEAERLREELAGTVSDMKQKKFSKRLKILEAFQESGNRPEWMV
MTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILEEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGRPIIVPSQDIVLGLYYLSVAREGEPGEGKIFADLGEIEAAMD
AGVVSLHAKIKARHTEMNADGQLVRKVIDTTPGRMKIAALLPHHPQIGHRLIEKALTKKE
IGNLIDIVYRHCGQKATVIFADKVMGLGFKEAAKAGISFGKDDIIIPVRKTAIVEETRKL
AEEYEQQYADGLITKGEKYNKVVDAWAKATDRVADEMMAELQMKHKDENGREKEINAIYM
MAHSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIVSNFKEGLTVQEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIIVEEDCGTTRGITLRAVVEGGDVLVSLGARVLGRFT
AEDVKDPGTGELVVPADTYIDENIADAIEAAVVQSVKVRSVLTCEAKIGVCGACYGRDLA
RGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAEQSFFEASNEGTVRVIGPTV
VGSDGALVIMSRNTTVSVLVDGKERETYKPPYGARLRVKDGDLVKRGQRLGDWDPYTTPI
ITEVAGKIRAEDLVDGLSIREEVDEATGIAQRVVADWRTSARGSDLRPAMGVLSEDGSYK
RLSNGGEARYLLSAGAILSVADGDEVKPGEVIARIPTEGAKTRDITGGLPRVAELFEARR
PKDCAVIAEMDGRVEFGKDYKNKRRIKITPDVDADGNQPEAVEFLIPKGKHIAVHDGDYI
TKGEYIIDGNPDPHDILRILGVEALANFLVDEIQEVYRLQGVPINDKHIETIVRQMLQKV
EIIEPGDTGLIKGDHLDKPEFDKEQEKAIARGGRPAVTQPVLLGITKASLQTKSFISAAS
FQETTRVLTEASVHGKTDTLEGLKENVIVGRLIPAGTGSYLRSLQRVAAKRDEQLAQQRE
DAMEPLPAEIALSDAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaatccggtccaggccgctccgaccttcgaccag
atccgcatctcgctcgcttcgccggaaaagatccgttcgtggtcgttcggcgagatcaag
aagcccgagaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcc
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggtgttgaagtcaccctggcccgcgtccgccgc
gagcgcatgggccacatcgaactggcctcgccggtcgcccacatctggttcctgaagtcg
ctgccctcgcgcatcgccatgatgctcgacatgccgctgaaggacatcgaacgcgtcctc
tacttcgaatactacatcgtcaccgagccgggcctgacgccgctgaagcagcaccagctg
ctcagcgaagacgactacatgcgcgcccaggaagaatacggcgatgacagcttcaccgcc
gagatcggcgcggaagccatccagaacctgctgaaggcgatcgacctcgaaaaagaggcc
gagcgtctgcgcgaggaactggccggcaccgtgtcggacatgaagcagaagaagttttcg
aagcgcctgaagatcctggaagccttccaggaaagcggcaatcgtcccgagtggatggtc
atgaccgtggtgccggtgatcccgccggaactgcgtccgctggtgccgctggacggcggc
cgcttcgcgacctcggacctgaacgacctgtatcgtcgggtcatcaaccgcaacaaccgc
ctcaagcgcctgatcgagctgcgcgcgcccgatatcatcatccgtaacgaaaagcggatg
ctgcaggagtcggtcgacgccctgttcgacaacggccgtcgcggtcgcgtgatcacgggc
gccaacaagcgtccgctgaagtcgctggccgacatgcttaagggcaagcagggccgcttc
cgtcagaacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtgggt
cccgagctgaagctgcacgagtgcggcctgcccaagaagatggcgctggagctgttcaag
ccgttcatctatgcgcgccttgacgccaagggcctgtcgggcaccgtcaagcagtccaag
cgcatggtcgagcgcgaacagccgcaggtgtgggacatcctcgaagaggtgatccgcgag
cacccggtgctgctgaatcgcgccccgaccctgcaccgtctgggcatccaggcgttcgaa
cccaagctgatcgagggcaaggccatccagctgcacccgctggtctgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgagcctggaagctcagctg
gaagcgcgcgttctgatgatgtcgaccaacaacatcctgtcgcccgccaacggccgcccg
atcatcgtgccgtcgcaggacatcgtcctgggtctgtactacctgtcggtcgcgcgcgaa
ggtgagccgggcgaaggcaagatcttcgccgacctcggtgaaatcgaagccgccatggac
gcgggcgtcgtctcgctgcacgccaagatcaaggcgcgccacaccgaaatgaacgccgac
ggtcagctggtccgcaaggtgatcgacactacgccgggccgcatgaagatcgccgccctg
ctgccgcaccatccccagattggccaccgcctgatcgagaaggcgctgaccaagaaggaa
atcggcaacctgatcgacatcgtctaccgccactgcggtcagaaggcgacggtcatcttc
gccgacaaggtcatgggcctgggcttcaaggaagccgccaaggcgggcatctcgttcggc
aaggacgacatcatcatccccgttcgcaaaaccgcgatcgtggaagagacccgcaagctg
gctgaagagtacgagcagcagtacgccgacggcctgatcaccaagggtgagaagtacaac
aaggtcgttgacgcctgggccaaggccaccgatcgcgtcgccgacgagatgatggccgag
cttcagatgaagcataaggacgagaacggccgcgaaaaggaaatcaacgccatctacatg
atggcgcactccggcgcccgtggttcgcaagctcagatgaagcagctgggcggcatgcgc
ggcctgatggccaagccttccggtgaaatcatcgagaccccgatcgtctcgaacttcaag
gaaggcctgaccgttcaggagtacttcaactccacccacggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggctacttgacccgtcgtctggtcgacgtcgcg
caggactgcatcatcgtcgaggaagactgcggcaccacgcggggcatcaccctgcgcgcc
gtggtcgagggcggtgacgtgctggtctcgctgggcgcccgcgtcctgggccgcttcacg
gccgaggacgtcaaggatcctggcaccggtgaactggtggttccggccgacacctatatc
gacgagaacatcgctgacgccatcgaggctgcggtcgttcagtcggtgaaggtccgctcg
gttctgacctgcgaagccaagatcggcgtctgcggcgcctgctacggccgcgacctggcc
cgcggcacgccggtgaacatcggtgaagcggtcggcgtcatcgccgcccagtcgatcggt
gagcccggcacgcagctgacgatgcgcacgttccacatcggcggcaccgcccaggtggct
gagcaatcgttcttcgaggcctcgaacgagggtacggtccgcgtgatcggcccgacggtc
gtgggttcggacggcgcgctggtcatcatgagccgcaacacgaccgtcagcgttctggtc
gacggcaaggagcgtgaaacctacaagccgccgtacggcgcccgcctgcgggtgaaggac
ggcgacctggtgaagcgcggccagcgcctcggcgattgggacccctacaccaccccgatc
atcaccgaagtggccggcaagatccgcgccgaagacctggtcgatggcctgtcgatccgc
gaggaagtcgacgaagccaccggcatcgcccagcgcgtggtcgccgactggcgcacctcg
gctcgcggttcggacctgcgtccggctatgggcgtgctgtcggaagacggttcgtacaag
cgcctcagcaacggcggcgaggctcgttacctcctgtcggccggcgccattctctcggtc
gccgacggcgacgaggtgaagccgggtgaagtgatcgcacgtatcccgaccgaaggcgcc
aagacccgggacatcaccggtggtctgccgcgcgtcgccgaactcttcgaagcccgccgt
ccgaaggactgcgcggtcatcgcggaaatggacggccgtgtcgaattcggcaaggactac
aagaacaagcgccgtatcaagatcacgccggacgtcgacgccgacggcaaccagcccgaa
gcggtcgagttcctgatcccgaagggcaagcacatcgctgtccacgacggtgactacatc
accaagggcgagtacatcatcgacggcaacccggatccgcatgacatcctgcgcatcctg
ggcgtcgaagccctggccaacttcctcgtcgacgagatccaggaggtctaccgtctgcag
ggcgtgccgatcaacgacaagcacatcgagacgatcgttcgccagatgctgcagaaggtc
gagatcatcgagccgggcgatacgggtctcatcaagggtgaccacctcgacaagcccgag
ttcgacaaggaacaggaaaaggcgatcgcccgcggcggccgtccggctgtgacccagccg
gtgctgctcggcatcaccaaggcctcgctgcagaccaagagcttcatctcggccgcgtcg
ttccaggaaacgacccgcgtcctgaccgaagcctcggtgcacggcaagaccgacaccctg
gaaggcctgaaggaaaacgtcatcgtgggtcgcctgatccccgccggtacgggttcctac
ctgcgcagcctgcagcgcgtcgccgccaagcgcgacgagcaactggcccagcagcgcgaa
gatgcgatggagccgctgccggccgagatcgctctttcggacgccgaatag
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integrated database retrieval system
