Caulobacter sp. FWC26: CSW63_18970
Help
Entry
CSW63_18970 CDS
T05901
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cauf
Caulobacter sp. FWC26
Pathway
cauf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cauf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSW63_18970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cauf03019
]
CSW63_18970
Enzymes [BR:
cauf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CSW63_18970
Messenger RNA biogenesis [BR:
cauf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSW63_18970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
AZS22528
LinkDB
All DBs
Position
complement(3661193..3662620)
Genome browser
AA seq
475 aa
AA seq
DB search
MTQFSDLGLAKPLLKALAEKGYKEPTPIQAQAIPVVLQGKDLLGIAQTGTGKTAAFALPI
LQRLAEDRKPAPRRGFRCLVLSPTRELATQIAENFKAYAVHMGLSVHTIYGGVKYGPQMK
ALAGGIDVLVATPGRLMDHMAEKSAIVSGTEIFVLDEADQMLDLGFVVPIRKIAAQLTKN
RQNLFFSATMPSEIGKLAGELLNNPVQVSVAPQATTVERIDQRVLFIEAQRKRPLLAELF
ADSSFSRTIVFTRTKRGADRVAKYLNAAGIEAASIHGDKTQGQRERALAAFKAGEMRALV
ATDIAARGIDVNDVSHVINYELPNVPEAYVHRIGRTARKGKDGIAISFCADDERNLLKDI
QKATRQTIPSFDRRNDKQLAAAAAVADKLVPAEKYVDPRKADPRNNVPSELRRKRNRKPG
GGAGRTEGGQKSGQGRGQGRDQARGQAPKGAAPRNEFRGPKRAEAASEKRWSPID
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaattttccgaccttggcctggccaagccgctgctgaaggcgcttgctgaaaag
ggctacaaggaaccgacgccgatccaggcccaggccattccggtggtgctgcaaggcaag
gacctgttgggcatcgcccagacgggcaccggcaagaccgccgccttcgccctgccgatc
ctgcagcgcctggccgaagaccgtaagccggccccgcgccgcggcttccgctgcctggtc
ctttccccgacccgcgagctggccacccagatcgccgagaacttcaaggcctacgccgtc
catatgggcctgtcggtccacaccatctatggcggcgtcaagtacggcccgcagatgaag
gccctggccggcggcatcgacgttctggtcgccacccccggccgcctgatggaccacatg
gccgagaagtcggccatcgtctcgggcaccgagattttcgtcctcgacgaagccgaccag
atgctggacctgggtttcgtggtgccgatccgcaagatcgccgcccaactgaccaagaac
cgccagaacctgttcttctcggccaccatgcccagcgagatcggcaagctggccggcgag
ctcttgaacaaccccgtgcaggtctcggtcgccccgcaggccacgacggtcgagcgcatc
gaccagcgcgtgctgttcatcgaggcccagcgcaagcgtccgctgctggccgaactgttc
gccgatagcagcttctcgcgcaccatcgtcttcacccgcaccaagcgcggcgccgaccgg
gtggccaagtatctgaacgccgccggcatcgaggccgcctcgatccacggcgacaagacc
cagggtcagcgcgagcgggccctggcggccttcaaggccggcgagatgcgggccctggtg
gccaccgacatcgccgcgcgcggcatcgacgtcaacgacgtcagccacgtcatcaactac
gagctgcccaacgtgccggaggcctatgtccaccggatcggccgcaccgcccgcaagggc
aaggacggcatcgccatcagcttctgcgccgatgacgaacgcaatctgctgaaggacatc
cagaaggccacccgccagacgatcccgtccttcgaccgtcgcaatgacaagcagctggcc
gccgcggccgccgtcgccgacaagctggttccggctgaaaagtacgtcgacccgcgcaag
gccgacccgcgcaacaacgtcccgtccgaactgcgccgcaagcgtaaccgcaagcctggc
ggcggcgctggccgaaccgagggcggccagaagtccggccaagggcgtggccagggtcgg
gatcaggcccgggggcaggcgcccaagggcgcggctccccgaaacgagtttcgcggcccc
aagcgcgccgaggccgccagcgagaagcgctggtcgccgatcgactga
DBGET
integrated database retrieval system
