| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
caui Corynebacterium auris
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:caui00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAURIS_01810 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:caui03021]
CAURIS_01810 (rpoC)
03400 DNA repair and recombination proteins [BR:caui03400]
CAURIS_01810 (rpoC)
Enzymes [BR:caui01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAURIS_01810 (rpoC)
Transcription machinery [BR:caui03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAURIS_01810 (rpoC)
DNA repair and recombination proteins [BR:caui03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAURIS_01810 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
367749..371747
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| AA seq |
1332 aa
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDMSTLEAEMILEKKDVESDANSEIAERAQKLEED
LAELEASGATAAARKKVQQAADKEMTHIREAAEREVERLDEIWQTFVKLAPKQMVIDENL
YEELGDRYEDYFTGGMGAEAIQTLIRNFDLDTEAEELRSIIAEGKGQRKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLQLHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMLKGSTEIGGE
GAYAPADDNGPATGVYSSYREAIMAYDLGVLGLQAPIRVRIDHLRPTVEIEAEQFPEGWE
RGQAWMAETTLGRIMFNELLPFNFPYQEGAMVRKGGGAGKVLLGDIIQSMVEKYPMITVA
QTLDKMKDAGFYWATRSGVTISMSDVLVLPNKTEVLEQYEKEAEEIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLTVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTHQGVKVPVAAEAGGTWVRDELVETSVSGRVLASDAKDAEGNVVLEGGTELTEERID
ALVAAGVTEIKVRSVLTCQTATGVCAKCYGKSMASGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVTLEDEGNFWTLTIHPDD
GSDLVVYEKLSKRQGLAQVRRPMESNPDAMIERSLREGDHVDVGDRLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGTTEFLPGTLVDLA
EARQVNAAAVAENGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDK
LIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPSFGDSIYGDDGYGEFTGA
SVPLDEYGFDQM |
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| NT seq |
3999 nt +upstreamnt +downstreamnt
gtgtttgacgtaaacctcttcgacgagcttcgcattggcctggccaccgccgacgacatc
cgccgctggtcccacggtgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
ccggagaaggacggcctcttctgcgagcgcatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgcgccg
gtcacccacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctcgacctg
gccccgaaggacctcgagcgcattatttacttcgccgccaacatcatcacgagcgttgac
gaggaagcgcgccacaacgacatgtcgaccctcgaggccgagatgatcctggagaagaag
gacgtcgaaagcgacgccaactccgagatcgccgagcgcgcgcagaagctcgaggaggac
ctcgcagagctcgaggcctcgggcgccacggctgccgcccgcaagaaggtgcagcaggcc
gccgacaaggagatgacgcacatccgcgaggcggcggagcgagaggtggagcgcctcgac
gagatctggcagaccttcgtcaagctcgccccgaagcagatggtcatcgacgaaaacctc
tacgaggagctcggtgaccgctacgaggactacttcaccggcggcatgggcgcggaggcg
atccagacgctgatccgcaacttcgacctcgacaccgaggcggaggagctgcgctccatc
atcgccgagggcaaggggcagcggaaggtccgcgcgctcaagcgcctcaaggtcgtcgcc
gcgttccagcgctccggcaatgacccggccggcatgatcctcgacgcgattccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgctttgccacctccgacctg
aacgatctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcc
ctgttcgacaacggccgccgcggccgccccgtcaccggcccgggcaaccgcccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccgcttccgccagaaccttctgggcaag
cgcgtcgactactccggccgctccgtcatcatcgtcggcccgcagctgcagctgcacgag
tgcgggctgcccaagctcatggcactggagctgttcaagccgttcgtgatgaagcgcctg
gtggacaacgactacgcgcagaacatcaagagcgccaagcgcatggtcgagcgccagcgc
cccgaggtgtgggacgtgctcgaggaggccatctccgagcacccggtgctgcttaaccgc
gcaccgacgctgcaccgcctgggcatccaggccttcgagccgaagctggtcgagggcaag
gccatccagctgcacccgctggcgtgtgaggccttcaacgccgacttcgacggcgaccag
atggcagtgcacctgccgctgtccgccgaggcgcaggcggaggcccgcgtgctcatgctc
tcctccaacaacatcctgtccccggcgtccggcaagccgctggccatgccgcgcctggac
atggtgaccggcctgtacttcttgaccatgctgaagggctcgaccgagatcggcggcgag
ggcgcctacgccccggccgacgacaacggccccgccaccggcgtgtactcctcctaccgc
gaggccatcatggcctacgacctgggcgtgctcggccttcaggcgccgatccgcgtgcgg
atcgatcacctgcgcccgaccgtcgagatcgaggcggagcagttcccggagggctgggag
cgcggccaggcgtggatggcggagaccaccctcggccggatcatgttcaacgagctgctg
ccgttcaacttcccgtaccaggaaggcgcgatggtgcgcaagggcggcggcgccggcaag
gtgctgctcggcgacatcatccagtcgatggtggagaagtacccgatgatcaccgtcgcc
cagaccctggacaagatgaaggatgccggcttctactgggccacccgctccggcgtgacc
atctccatgtccgacgttctcgtcctgccgaacaagaccgaggtcctcgagcagtacgag
aaggaggccgaggagatcgagcgcaagttctgggagaagggcgccctgacggaggagaac
cgctacgaccgcctggtcgagctgtggcaggacgccaccaacaaggtgggtcaggccgtg
gaggacctctacccggacgacaacccgatcccgatgatcgtgaagtcgggtgcggccggc
aacatgcgccagatctggacgctcgccggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgagggcctgacggtgatggagtac
ttcaacaactcccacggctcccgcaagggcctcgccgacaccgctctgcgcaccgctgac
tccggctacctcacccgccgccttgtcgacgtcgcccaggacgtcatcgtccgcgaagag
gactgcggcacccaccagggcgtcaaggtcccggttgcggccgaggcgggcggcacgtgg
gtccgcgacgagctcgtggagacctcagtgtcgggccgcgtcctcgcctccgacgcgaag
gacgccgagggcaacgtcgtcctcgagggcggcacggagctcaccgaggagcgtatcgac
gccctcgtcgccgcgggcgttaccgaaatcaaggtccgttcggtgctgacgtgccagacc
gcgaccggcgtgtgcgcgaagtgctacggcaagtccatggcctccggcaagctggtcgat
atcggcgaggccgtgggcatcgtcgcggcccagtccattggtgagcccggtacgcagctg
accatgcgcaccttccaccagggcggtgtcggcggcgacatcaccggcggcctgccgcgc
gtgcaggagctgttcgaggcccgcgtgcccaagaaccgcgccccgatcgcctctgtcgcc
ggcacggtgacgctcgaggacgagggcaacttctggacgctgacgatccacccggacgac
ggctcggacctcgtggtctacgagaagctgtcgaagcgccagggcctggcccaggtgcgc
cgcccgatggagtccaacccggacgccatgatcgagcgctccctgcgcgagggcgaccac
gttgacgtgggcgaccgcctgctgcgcggcgcggccgacccgcacgacgtgctcgaggtc
ctcggccgccgcggtgtggaaaagcacctcatcgacgaggtgcaggccgtctaccgcacg
cagggtgtgtcgattcacgacaagcacatcgagatcatcatccgccagatgctgcgccgc
ggcaccgtcatcgactcgggcacgaccgagttcctgccggggacgctggtcgacctcgcc
gaggcgcgccaggtcaacgccgcggcggtggccgagaacggccagccggcggagatgcgc
tcggagatcatgggcatcaccaaggcctcgctggcaacggagtcctggctgtctgcggcc
tccttccaggagaccacgcgagtgcttaccgacgccgcgatcaacaagcgctccgacaag
ctgatcggcctgaaggagaacgtgatcatcggtaagctcatcccggctggtaccggcatc
tcgcgctaccgcaacatccaggtcaagccgaccgaggcggcgcgctccgccgcgtactcg
atcccgagcttcggcgactccatctacggagacgacggctacggtgagttcaccggcgcg
tccgtgccgctggacgagtacgggttcgaccagatgtag |
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