Phenylobacterium montanum: KCG34_21020
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Entry
KCG34_21020 CDS
T07744
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
caul
Phenylobacterium montanum
Pathway
caul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCG34_21020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caul03019
]
KCG34_21020
Enzymes [BR:
caul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KCG34_21020
Messenger RNA biogenesis [BR:
caul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KCG34_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Fe-ADH
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QUD87508
UniProt:
A0A975FXX3
LinkDB
All DBs
Position
4609920..4611317
Genome browser
AA seq
465 aa
AA seq
DB search
MTQFTDLGLAKPLLKALAAEGYEKPTPIQAQAIPPVMLGRDLLGIAQTGTGKTAAFALPI
LHRLAEDKKPAPRRGARCVVLSPTRELASQIAESFRTYGAHMGVSVTVVFGGAKYGPQVK
ALAHGVDILVATPGRLIDHLGERTADLSSTEILVLDEADQMLDLGFLQPIRRIVSGMSRK
RQNLFFSATMPGEIGKLADELLNDPVKVAVTPVATTAERVEQKILFIEAPRKRALLAEMF
ESKDVTRALVFTRTKRGADRVAKYLEDAGVDAAAIHGDKSQSQRERALAAFKAGKARALI
ATDIAARGIDVDAVSHVIQYELPQTPEAYVHRIGRTARAGAAGIAISFCADDERNLLKDI
QKLTRQTIPSWDRRNDKGLGLITAATTSGPAPEQSLPQAKPRPAKPQHHRGPKPHGHRGR
DGQGSGQGAPQGQRQGNGGGRGKPQRAAGGAKPAGRSGGWDPMKG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaattcaccgacctcggcctcgccaagccgctcctgaaagcgctggccgccgag
ggctatgaaaagccgaccccaatccaggcccaggccatccctccggtcatgctgggcagg
gaccttctgggcatcgcccagaccggcaccggcaagaccgccgccttcgccctgccgatc
ctgcatcgcttggctgaagacaagaagcctgccccgcgccgcggcgcccgctgtgtcgtg
ctgtcgcccacgcgcgaactggccagccagatcgccgagagcttccgcacctatggcgct
cacatgggcgtctctgtgaccgtggtgttcggcggcgccaaatacggcccgcaggtcaag
gccctggcccacggggtcgacatcctggtcgccacccccggccgcctgatcgaccacctg
ggcgagcgcaccgccgacctctcctccactgagatcctggtgctggacgaggccgaccag
atgctggacctgggcttcctgcagcccatccgccgcatcgtctccggcatgagccgcaag
cgccagaacctgttcttctcggccaccatgcccggcgagatcggcaagctggccgatgaa
ctcctgaacgatccggtcaaggtggccgtgaccccggtcgccaccaccgccgagcgggtc
gagcagaagatcctgttcatcgaggccccgcgcaagcgcgccctgctggccgagatgttc
gagtccaaggacgtcacccgcgccctggtcttcacccgcaccaagcgcggcgccgaccgc
gtggccaagtacctggaagacgccggcgtcgacgccgccgccatccacggcgacaaatcc
cagagccagcgcgaacgggcgctcgccgccttcaaggccggcaaggcccgcgccctgatc
gccaccgacatcgccgcccgcgggatcgacgtcgacgcggtcagccacgtgatccagtac
gaactgccgcagacgccggaagcctatgtccaccgcatcggccgcacggcccgcgccggc
gcggccggcatcgccatcagcttctgcgccgacgatgagcggaacctgctgaaagacatc
cagaagctgacccgccagaccatcccctcctgggaccggcgcaacgacaagggcctgggc
ctgatcacggccgccaccacctcgggcccggcgccggaacagtccctgccgcaggccaag
ccgcgcccggccaagccgcagcatcaccgcggacccaagccgcacggccaccgcggccgc
gacggccagggctcgggccagggcgcaccgcaaggccagcgccagggcaatggcggcggc
cgcggcaagccgcaacgcgcggcgggcggcgccaagccggctgggcggtcgggcggctgg
gatccgatgaaggggtag
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