Phenylobacterium montanum: KCG34_24725
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Entry
KCG34_24725 CDS
T07744
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
caul
Phenylobacterium montanum
Brite
KEGG Orthology (KO) [BR:
caul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caul03032
]
KCG34_24725 (topA)
03400 DNA repair and recombination proteins [BR:
caul03400
]
KCG34_24725 (topA)
Enzymes [BR:
caul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KCG34_24725 (topA)
DNA replication proteins [BR:
caul03032
]
Prokaryotic type
DNA Topoisomerases
KCG34_24725 (topA)
DNA repair and recombination proteins [BR:
caul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KCG34_24725 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QUD88193
UniProt:
A0A975G0C3
LinkDB
All DBs
Position
complement(5395799..5398435)
Genome browser
AA seq
878 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYTVLASYGHVRDLPSKDGSVQPDDDFAMTWEVEAKAAK
RLSDIADALKGADRLILATDPDREGEAISWHVLEVLNRKKAVKGATVERVVFNAITKSAV
TEAMKHPRDIDMELVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVVDR
EIEIERFKTQEYWTVDADVTAGTDPFLARLVKHQGKKLSKFDLSNEVDATAAKAAVEAAS
FKVASVEKKPGRRSPPPPFTTSTLQQEAARKLGFSAQRTMQAAQRLYEGVDIGGETVGLI
TYMRTDGVQSSPEAIDEARQVIAGRWGKEYVPESGRIYKTKAKNAQEAHEAIRPTSLSRN
PGSLRLEPELGRLYELIWKRMIASQMESARIERTTVELESADGKTGLRATGQVVLFDGYL
AVYEEGRDDEADEDGGRLPAIREGADAKVLAARADQHFTEPPPRYSEASLVKKMEELGIG
RPSTYASILTVLRDRAYVRMDKNRFIPEDKGRLVTAFLEQFFRRYVEYDFTAALEEKLDL
VSAGELDWKALLREFWKDFAAQVGEIGELRTTNILDALNESLGPHIFPDKGDGSDPRVCP
TCGTGRLSLKTGKFGAFIGCSNYPECRYTRPIAAPDGEEAAESGDRELGQNPATGQAVWL
RIGRFGPYVEETGGEKPKRASLPKDWPPAGMDLEKALRLLSLPREVGAHPDDGGMILAGI
GRYGPYVQHNGTYANLPTADEVFEVGLNRAVTVLAEKRAGGGRGARGAGAAALKELGAHP
ADGEPVKILAGRFGPYIKHGGTNANVPRGKDPQELTLEEAVALLAEREAKGGGKKPAKGK
AAKPKAEKPGAAKKAPAKKAAPKKAAAKKPTAKKTAAE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcgtcgtcgagagtccggccaaggccaagaccatcaacaagtacctgggc
tccggctacacggtcctggccagctatggccacgtccgcgacctgccgtccaaggacggg
tcggtgcagcccgacgacgacttcgccatgacctgggaggtcgaggccaaggcggccaag
cggctttccgacatcgccgacgcgctgaagggcgccgaccgcctgatcctggccaccgac
ccggatcgcgagggcgaggcgatcagctggcacgtcttggaagtcctgaaccgcaagaag
gcggtcaagggcgccacggtcgagcgggtggtgttcaacgccatcaccaagtcggccgtc
accgaggcgatgaagcacccgcgcgacatcgacatggagctggtcgacgcctatctggcg
cgccgggccctggactatctggtgggcttcaccctgtcgccggtcctgtggcgcaagctg
ccgggcgcgcgctcggcgggccgggtccagtcggtggccctgcgcctggtcgtcgatcgc
gagatcgagatcgagcgcttcaagacccaggaatactggaccgtcgacgccgacgtgacc
gccgggaccgacccgttcctggcccgcctggtcaagcaccaaggcaagaagctctccaag
ttcgacctttcgaacgaagtggacgcgacggccgccaaggctgcggtcgaggcggccagc
ttcaaggtcgcctcggtggagaagaagccgggccggcgctcgccgccgccgcccttcacc
acctcgaccctgcagcaggaggccgcgcgcaagctgggcttctcggcccagcgcaccatg
caggcggcgcagaggctgtatgaaggcgtcgacatcggcggcgagaccgtcggcctgatc
acctatatgcggaccgacggggtgcagtcctcgcccgaggccatcgacgaggcccgccag
gtcatcgccggccgctggggcaaggaatacgtccccgagagcgggcgcatctacaagacc
aaggccaagaacgcccaggaggcccacgaggccatccgcccgaccagcctgtcgcgcaac
ccgggctcgctgcggctggagcccgagttgggccggctctacgagctgatctggaagcgg
atgatcgcttcgcagatggaatccgccaggatcgagcggaccacggtcgagctggagagc
gccgacggcaagaccggcctgcgcgccactggccaggtggtgctgttcgacggctacctc
gccgtctacgaggaaggccgcgacgacgaggcggacgaggacggcgggcgcctgccggcg
atccgcgaaggcgccgacgccaaggtcctggccgcccgcgccgaccagcacttcaccgag
ccgccgccgcgctattcggaagcctcactggtcaagaagatggaggagttgggcatcggc
cgcccctccacctacgcctcgatcctgaccgtgctcagagaccgcgcctatgtgcggatg
gacaagaaccggttcatccccgaggacaagggccggctggtcaccgccttcctggagcag
ttcttccgccgctacgtggaatacgacttcaccgcggcgctggaggagaagctggacctg
gtctcggccggcgagctggactggaaggcgctgctgcgcgagttctggaaggatttcgcc
gcccaggtgggcgagatcggcgagcttcgcaccaccaacatcctcgatgcgctgaacgaa
tccctcggcccgcacatcttccccgacaagggcgatgggtccgacccgcgcgtgtgcccg
acctgcggcaccgggcggctgtccttgaagaccggcaagttcggcgccttcatcggctgc
tccaactatccggaatgccgctatacacgcccgatcgccgcgccggatggggaagaggcc
gctgaaagcggcgaccgggaactcggccagaacccggccaccggccaggccgtgtggctg
cgcatcggccgctttggcccctacgtcgaagagaccggcggcgagaagcccaagcgcgcc
agcctgcccaaggactggccgccagcgggcatggacctggaaaaggccctgcgcctcctg
tccctgccgcgcgaggtgggcgcccacccggacgacggcggcatgatcctggccggcatc
ggccgctatggcccctacgtgcagcacaacggcacctacgccaacctgccgaccgccgac
gaggtgttcgaggtcgggctgaaccgcgcggtgacggtgctggcggaaaagcgcgccggc
ggcggccgcggcgcacgcggcgccggggctgcggcgctgaaggagctgggcgcccacccg
gccgacggcgagccggtgaagatcctggccggtcgcttcggcccctacatcaagcacggc
ggcaccaacgccaacgtgcccaggggcaaggacccgcaggaactgaccctggaagaagcc
gtggccctgctggccgaacgcgaagccaagggcggcggcaagaagccggccaagggcaag
gctgccaagcccaaggcggaaaagccgggggcggcgaagaaggctccggcgaaaaaggct
gccccgaaaaaggccgcggccaagaagccgacggcgaagaagaccgcggcggaatag
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