Clostridium felsineum DSM 793: CLAUR_006580
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Entry
CLAUR_006580 CDS
T08241
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun00900
Terpenoid backbone biosynthesis
caun01100
Metabolic pathways
caun01110
Biosynthesis of secondary metabolites
caun03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLAUR_006580 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLAUR_006580 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
caun03011
]
CLAUR_006580 (ispH)
Enzymes [BR:
caun01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CLAUR_006580 (ispH)
Ribosome [BR:
caun03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLAUR_006580 (ispH)
Bacteria
CLAUR_006580 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
URZ00670
LinkDB
All DBs
Position
741017..742942
Genome browser
AA seq
641 aa
AA seq
DB search
MRKVILAEKAGFCFGVKRAVDMAILTQKKYNKKIYTLGELIHNNDVVNKLKNSSIYPIEI
KEIDKLKENDVILVRSHGISKEVYDMLLAKGLTVIDATCPFVSKIQEKVRKYSELGYDIV
IVGDKNHPEVIGINGWCNNKAIISKKGEGLEDIGSKVCIVSQTTEKLENWEKVLSEVESK
VDEVISFNTICNATSERQKIANDLSEKVDVMVVIGGKQSSNTTKLYEICKANCKDTIHVE
NSGEIPENILKNKNSINIGVTAGASTPDWIIEEAINKMSENQISNETNNEMADAMKFIAE
NEEKIYVGASVTGEIIQVSDKEVFLNINYKRDGIIPKSEIDDDGKDLKELFTVGDKIVAK
IIKLKDADNYVVLSVKELQREQGYKDIKDAFENKTTLNVVVKEDVKGGVIASYKGIRVFI
PASHVELFHVDNLKEYIGKSFEVAIIEYSTKKRQTKIVASRRALLSREKEKVEETVWNKL
DEGQIVEGEVKRLTDFGAFVEIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYILSID
KENKKLSLSIKKLTENPWSNVEEKYPVGSVVLGKVVRFADFGAFVELEPGVDGLVHISEI
SHKRIAKPSDALEIGEEIKAKILEVSSDEKKIGLSIREVEE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggttatacttgctgaaaaagctggtttttgttttggagtaaagagagctgtt
gatatggcaattttaactcaaaagaaatataataaaaagatttataccttaggtgagtta
attcataacaatgatgtagttaataagcttaagaatagtagcatatatcctattgaaatt
aaagaaatagataaattaaaagaaaacgatgttatacttgtgagatcacatggaatttct
aaagaagtatatgatatgctcttagctaagggtcttactgtaattgatgcaacttgtcca
tttgtaagtaaaattcaagaaaaagttagaaagtacagtgaacttggatatgatatagta
attgttggagataaaaatcatccagaggtaattggaatcaatggttggtgcaataataaa
gccataatctctaaaaagggagaaggcttagaagatattggctcaaaggtttgcattgtt
tctcaaactacagaaaagcttgaaaactgggaaaaagttttaagtgaagttgaaagtaaa
gtagatgaagttatatcttttaatacaatatgtaatgctacatcggaaagacaaaaaata
gcgaatgatctttctgaaaaagtagatgttatggttgttattggtggaaaacaaagttca
aatacaaccaaattatacgaaatatgtaaagctaattgtaaggatactattcatgtagaa
aattcaggcgaaatacctgagaacatattaaaaaataaaaacagtattaacataggtgta
acggcgggagcttcaacacctgattggattattgaggaggcaattaataaaatgagtgaa
aatcaaatttcaaatgagacaaataatgaaatggctgatgcaatgaagtttatagctgaa
aatgaagagaaaatttatgttggtgcatcggtaacaggagaaattattcaggtttctgat
aaagaagtatttttaaacataaattataaaagagatggaataatacctaaaagtgaaata
gatgatgatggaaaagatttaaaagaattatttacagttggagataaaattgtagcaaaa
attataaaattaaaagatgcggacaattatgtagtattatcagtaaaagagcttcaaaga
gaacaaggatataaagatattaaagatgcttttgaaaataagactactctaaatgttgta
gttaaagaagatgtaaagggtggagtaattgcttcatacaaaggtataagagtatttatt
ccagcatcacatgtagaattatttcatgttgataatcttaaagagtatataggaaaaagt
tttgaagtagcaattattgaatactcaacaaagaaaagacaaactaaaatagtagcatct
agaagagcattattaagtagggaaaaagaaaaagtagaagaaaccgtttggaataaatta
gatgaaggacaaatagttgaaggtgaagttaagagattaactgattttggtgcttttgtg
gaaatagaaggtgtagatggacttcttcatgtatctgaaatatcatggggaagagttgaa
aagcctgcagatgttcttaaaataggagataaaattaaagtatatatattaagcatagat
aaggaaaataaaaagttatcattaagtattaaaaaattgactgaaaatccttggagtaat
gtagaagagaaatatcctgtaggttctgttgtacttggtaaagttgttagatttgcagac
ttcggtgcttttgtagagcttgaaccaggagttgatggtttagtccatatttcagaaata
agtcataaaagaatagcaaaaccatcagatgcccttgaaataggtgaagaaattaaagcg
aaaatattagaagtaagttctgatgaaaagaaaataggtttaagtataagagaagttgaa
gaataa
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