Clostridium felsineum DSM 793: CLAUR_006980
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Entry
CLAUR_006980 CDS
T08241
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caun
Clostridium felsineum DSM 793
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caun03016
]
CLAUR_006980 (truB)
Enzymes [BR:
caun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLAUR_006980 (truB)
Transfer RNA biogenesis [BR:
caun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLAUR_006980 (truB)
Prokaryotic type
CLAUR_006980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
URZ00710
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All DBs
Position
complement(788907..789776)
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AA seq
289 aa
AA seq
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MDGIINIFKPTGVTSFDVVRKVKKISKEKKVGHTGTLDPLASGVLPVCIGKSTKIVDLVM
AGKKVYDAEMKLGEITDTYDREGKVLREAKVNLTNKEIIDEVMSFKGEISQVPPMYSALK
VNGVKLYDLARKGIEIERTSRNVTIYDMNILNIDIPFVKFRVECSKGTYIRSLCYDIGEA
LGCGAMMYNLTRISSGIFNESKSIHLDNLNETNFSENIIPIDKFLINYEEFVVDEKFEKL
LINGVNISDKRLVSKILDQKIYRVYNIEKKFLGLARLNENGFKMIKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggtataataaatatatttaagccaacaggagttacatcttttgatgtagtgaga
aaagtaaaaaaaatttcaaaagaaaagaaagtagggcatacagggacacttgatccattg
gcatcaggtgttttgcctgtttgtattggaaagtctactaaaattgtagacttagttatg
gcaggaaaaaaagtatatgatgcagagatgaaacttggagaaataactgatacttatgac
agagaaggaaaagttttaagagaagccaaggtaaacttgacaaataaagaaataatcgat
gaagttatgagttttaaaggtgaaatttctcaagtgccaccaatgtattcagcccttaaa
gtaaatggtgtaaaactctatgatttagctagaaaaggtatcgaaatcgaaagaacttca
agaaatgtaactatatatgacatgaatattttaaatatagacataccttttgttaagttt
cgtgttgaatgttcaaagggaacctacataagaagtttatgttatgatataggagaagct
ttaggttgcggagcaatgatgtacaatcttacaagaatatcttcaggaatttttaatgaa
tctaaaagtatacatttagataatcttaatgagacaaacttttcagagaatataattcca
attgataaattcctaataaattatgaggaatttgtagtggatgaaaaattcgaaaaatta
ttaataaatggagtgaatatctctgataaaagattagtttcaaaaattttggaccaaaaa
atatatagagtctataacatagaaaagaaatttttgggtcttgcacgtttaaatgaaaat
ggatttaaaatgattaaattactaacgtag
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