Clostridium felsineum DSM 793: CLAUR_008790
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Entry
CLAUR_008790 CDS
T08241
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun00550
Peptidoglycan biosynthesis
caun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLAUR_008790 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caun01011
]
CLAUR_008790 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
caun01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLAUR_008790 (spoVD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
PAS_6
Motif
Other DBs
NCBI-ProteinID:
URZ00891
LinkDB
All DBs
Position
complement(970557..972743)
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AA seq
728 aa
AA seq
DB search
MPKRILVDKATIRNRIFVVFLILTCLILLLCYSLFNVMVAKSVKYKKMAQEQWTSEVKIS
AKRGRILDRNEEELAISGNVYRVDLDLNTIKNSLEEKKMKMDELGDKLASALEMDKKDVL
KQLNKRFKDGRPMGSAILTRRIDKAKANKVLAINVKGVMVSPDTKRYYPNSNFLSQVIGH
TNSDGDGLTGVELKYNSYLKGKPGVRKAEIDKNSANLPYTISEYSKPLDGRDVVLTIDKN
MQYFAEKYAQEALVNNKAKAVSIIIMNPKNGEILAMANNPDYDLNNPWDKSKSYDELQKS
WRNRAVSDAFEPGSIFKVITSSAAMSLGVVHEDDKFHCGGSITVAKKTIHCWKRTGHGDE
TFVDILKNSCNVGFAELGERLGAKNLNDYINKFGFGKKTGIDLPGEARGIIRPTNKIGPV
DLATIAFGQSNTVSMVQYMQAFNSVANGGYLITPHVMKEISHVENNKEVVDKEYTDYNKK
RILDEGMTATLRGYLEKVVSEGGGKKAFIDGYHIAGKTGTAQKPNPNGGGYERGKYLASF
VGMAPANDPKVTVMVSIDEPDPSNYYAGQISAPVGQKVFNDIFNYLGIKPDVSTSDAAKS
MLKDVVIPNVRGMKKEDAMKTLKDLNIDSEVDGGGAYIANITPTPGITVKEGTKVVLYTS
DTPNYNSNDVIVPNLTGYSKKEAEEVLKSLGLDFKISGDGVVETQSIDAGKQVNKGTSIT
LDLEDISD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaaagaatattagttgataaggctactattagaaacagaatttttgttgtgttt
ctaattttaacttgtttaatactgcttttgtgttatagtctttttaatgttatggttgca
aaatctgtaaagtataaaaaaatggcacaagaacagtggacaagtgaggttaagatttca
gctaaaaggggaaggatattagataggaatgaagaagagctagctataagtggtaatgtc
tatagagtagatttggatttaaatactataaagaattcccttgaagagaaaaaaatgaaa
atggacgaacttggagataaacttgccagtgcactagagatggataaaaaggatgtttta
aagcagcttaataaaagatttaaagatggaagaccaatgggatcagccattttaacaaga
agaatagataaagctaaggctaacaaggtattagcgataaacgtaaaaggagtaatggta
tctcctgatactaaaagatattatcccaatagtaactttttatcacaggtaattggacat
actaactctgatggagatggattaactggagtagagcttaaatataacagttacttaaaa
ggtaaaccaggggtaagaaaagcagaaatagataaaaatagtgcaaatttaccatacaca
atatctgaatattcaaaaccgttggatggcagagatgttgtccttactatagataagaac
atgcaatatttcgctgaaaaatatgctcaggaggctttagtaaataataaggcaaaggct
gtttctataattataatgaatcctaaaaatggcgaaatacttgctatggctaacaatcca
gattatgatttgaataatccttgggataaaagtaagagctatgatgaacttcaaaaaagc
tggagaaatagagctgtaagtgatgcttttgaacctggatctatatttaaggttataaca
tcaagtgcagctatgagtttaggagtggttcatgaggatgataaatttcattgcggtgga
agtattacggtggctaaaaagactattcactgttggaaaagaactggccatggcgatgag
accttcgttgatatcttaaagaactcatgtaatgtaggttttgctgaattaggagagagg
cttggagccaagaatcttaatgactatataaataaatttggttttggaaaaaagacgggt
atagatcttccaggagaagcaagaggcataattagaccaacaaataaaataggacctgta
gatttggctacaatagcttttggacaatctaacactgtatccatggttcaatatatgcag
gcctttaattccgtagcaaatggaggttatttaataacaccacatgtaatgaaagaaata
agtcacgtagagaacaataaggaagttgtagataaggaatataccgattataataagaaa
aggattttggatgaaggtatgacagccaccttaagaggataccttgaaaaggtagtatca
gagggtggaggtaagaaggcatttattgatggataccatattgcaggaaaaacaggtaca
gctcaaaaaccaaatcctaatggtggaggatatgagcgtgggaagtatctagcatccttt
gttggaatggcaccagcaaatgaccctaaagttacggttatggtttcaatagatgaacca
gatccatcaaattattatgcaggtcaaatttctgcgccggtaggtcaaaaggtttttaat
gatatatttaattatttaggtataaagccagatgtatcaacttctgatgcagctaaaagt
atgcttaaggatgttgttattccgaatgttcgtggaatgaagaaggaagacgctatgaag
acgcttaaggatttaaatatagattcagaggttgatggaggaggtgcttatatagccaat
attacacctactccaggtataacagtaaaggaaggaacaaaagtagtactttacacaagc
gacactcctaattataatagtaatgatgttatagttccaaatttgacgggatatagcaaa
aaagaagcagaggaagtattaaaaagtcttggacttgattttaaaatttcaggagacggt
gttgtagaaacccagagtattgacgcaggaaagcaggtcaataaaggcacaagtataaca
cttgatttagaagatataagtgattaa
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