Clostridium felsineum DSM 793: CLAUR_011770
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Entry
CLAUR_011770 CDS
T08241
Symbol
mrdA_1
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun00550
Peptidoglycan biosynthesis
caun01100
Metabolic pathways
caun01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLAUR_011770 (mrdA_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAUR_011770 (mrdA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caun01011
]
CLAUR_011770 (mrdA_1)
Enzymes [BR:
caun01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLAUR_011770 (mrdA_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
caun01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLAUR_011770 (mrdA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
URZ01189
LinkDB
All DBs
Position
complement(1278879..1281605)
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AA seq
908 aa
AA seq
DB search
MKKRVKSKKIVYRCDVLMAVGILLFLCITFKLINLQITRSVLYKAKANIASHRFIKEFAP
RGQIIDATKTVLATNKQSFNITYIQTDDNKTEFYNTAAKVFYILDKNGEKQDDKFELKLD
GGYRFDFNTSDIEKIKRMKLRFLKDRGFEEDIIKNMYKGKRREIELTECEKKQVDDKLLK
ISAKEAFEKLITYYEIPKKYSITVGGQKIIKICDLKDLRRFMVVKDAVKMNIYSGYKPVV
IAKNVKEATAFEILQKSNELMGINISVEPIRYYPYGKLASNVLGYISKIAPSNSKEIDAY
KEKGYDVNTDLIGMTGIEAALENRMRGTSGGKIVDVNKYGKITGEIAKKDPYPGQNVQLT
INKDVQYAAEQSLINTMSRLRQRKSTVTNSGTAYLGNATRGAAVAIDVKTGGVIALASVP
NFNPNDFSNPSGISNDVIEKYFLSDILSKAKDMNVPEELYNTLFPKVGGVRTDKYDYLPK
PLYDYATLSLIPPGSTFKLLTAVAGLETGVITKDTKIDDPGYFIDGNYKVEFKADGPQGT
NNLIAAISKSSNAYFMTVGKYLRQKCGSNVLAKYAWKFGLGVPPESNINPSTGIEIKENF
GQVYNTYTSKNSFAQQGQWFIMEELKNEKYLKGISIDLYTSDSDSKQLSNLKIAIKDNIK
TSISTGKFDKNKIENLIDKLVNTDSMYKNKKISKSDIEYIASSIVKVEEDQYNQATTTSN
IYGAAIGQGINEFTPLQLANYVATIASNGKRHKVHLIDRITNVDGKVVYENRPEVVEDAA
IKKSTIDVVKEGMNAVDDSGTASGTFAKFPILTAGKTGTADPYSIDTEKAIKRTSYAVYV
GFAPRKDPRIAVATVVFDGGFGSGITNIAKDMYEAYFKDILKEKNFKFDVDVDAKPENYS
ENNKTLER
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagtaaaatccaaaaaaatagtttatagatgtgatgttctaatggctgta
gggatactactttttttatgcattacgtttaagcttataaatcttcaaataactcgaagt
gttttgtataaagcaaaggcaaacattgcatcacatagatttataaaagagtttgcacca
agaggacaaataatagatgccaccaaaacggttttggcaaccaataaacaaagttttaat
attacatatattcaaacggatgataataagacagagttctataatacggcagctaaggta
ttttatattttagataaaaatggtgaaaagcaagatgacaaatttgaacttaagcttgat
ggcggatataggtttgatttcaatacatccgatatagaaaaaataaaaaggatgaagctc
agatttctaaaggatagaggctttgaggaagatattataaaaaatatgtacaaaggaaaa
aggagagaaatagaacttacagagtgtgaaaaaaaacaagtagatgataagctgcttaaa
atatcagccaaagaagcttttgagaaattgattacatattatgaaattcctaaaaaatac
tcaataacagttggcggccaaaaaataattaaaatttgtgatttgaaagatttaagaagg
tttatggtagttaaagatgcagttaaaatgaatatttattcaggatataaaccagtcgtc
atagcaaaaaatgtaaaagaagctacagcttttgagattctacaaaaatcaaatgaactt
atgggaataaatatatcagtagaacctataagatattatccgtacggtaaactagcatca
aatgttttaggatatataagtaaaatagcaccttcaaattctaaagaaatagatgcgtat
aaggaaaaaggttatgatgttaatactgatttaataggaatgacaggaatagaagcggct
cttgagaatagaatgagaggtacttctggaggaaaaatagttgatgtaaataagtatggg
aaaataactggtgagattgcaaaaaaagatccatatccaggtcaaaatgtacaacttact
ataaacaaagatgtgcaatatgcggcagaacaatccttgataaatacaatgtcaaggctt
agacagcgaaaatctacagttactaattctgggactgcatatttggggaatgctacaagg
ggagcagctgttgctatagatgtaaaaacaggaggagtgatagctttagcatctgtacca
aattttaaccctaacgatttttcgaatccaagtggtatttccaatgatgtaatagaaaaa
tattttttgagtgatatcctttcaaaagcaaaagatatgaatgtgccagaggaactttat
aataccttgtttcctaaagttgggggagtaaggactgataaatatgactatcttccaaag
cctctttatgattatgcaacattgtcattgataccaccagggtcaacctttaaattatta
acagctgtagcaggtcttgaaactggagttataacaaaagatacaaagattgatgatcct
ggatattttatagatggaaattataaagtagagtttaaagcagatggaccacaaggaact
aataatttaatagctgctatatcaaagtcgagtaatgcatattttatgacagttggaaaa
tatttaagacaaaaatgtggcagtaatgttttggcaaagtatgcatggaagtttggactt
ggagtaccaccagagtccaatataaatccttctacaggaatagagattaaggaaaacttt
ggtcaggtatacaatacttataccagtaaaaatagctttgctcagcagggtcagtggttt
ataatggaggaacttaaaaacgaaaaatatttaaaaggtatatctatagatttgtatact
agtgatagtgattcaaagcagctttcaaacttaaaaatagcaataaaggataatataaaa
acatctataagtacaggaaaatttgataaaaataaaatagagaatcttatagacaaactt
gtgaatacagatagcatgtacaagaataaaaaaatttcaaagtcagatatagagtatatt
gcaagttcaatagttaaggtagaagaggatcagtacaatcaagctactactacatccaat
atttatggagcagctataggtcaaggaattaatgagttcacaccacttcaacttgctaat
tatgttgccaccatagctagtaatggaaagagacataaagttcatcttatagatagaatt
actaatgtagatggaaaagtagtgtatgaaaataggccggaagttgtagaggatgcagca
attaaaaaatcaactatagatgtggtaaaggaaggaatgaatgcagttgatgatagcggt
actgctagtggtaccttcgctaaatttccaatattaacagctggaaaaacaggaacagca
gatccttatagtattgatactgaaaaggcaataaaaagaacctcctatgctgtttatgtt
ggttttgcacctagaaaagatcctagaatagcagtagctactgtggtatttgatggtggc
tttggaagcggaattactaatatagctaaagacatgtatgaagcttattttaaagatata
ttaaaagagaagaattttaaatttgatgtggatgtagatgcaaaacctgagaattacagt
gaaaacaataagacacttgaaagatag
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