Clostridium felsineum DSM 793: CLAUR_019200
Help
Entry
CLAUR_019200 CDS
T08241
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAUR_019200 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caun03019
]
CLAUR_019200 (cshA)
03009 Ribosome biogenesis [BR:
caun03009
]
CLAUR_019200 (cshA)
Enzymes [BR:
caun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAUR_019200 (cshA)
Messenger RNA biogenesis [BR:
caun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLAUR_019200 (cshA)
Ribosome biogenesis [BR:
caun03009
]
Prokaryotic type
rRNA helicases
CLAUR_019200 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CdiA_C_tRNase
AAA_19
NDK
AAA_30
ParM_N
Motif
Other DBs
NCBI-ProteinID:
URZ01923
LinkDB
All DBs
Position
complement(2163744..2165336)
Genome browser
AA seq
530 aa
AA seq
DB search
MENKKFSDLKLNSSVLKAIDDMGFEEPSNIQAEAIPVVIDGYDMIGQAQTGTGKTVAFGA
PIISKIKDINEREGVQAIILTPTRELAIQITDELTRLSKYARVRILPIYGGQSIERQMRA
IKRGVDVIVATPGRIMDHIKRKTVRLDKVKFLVLDEADEMLDMGFIDDIEGIIKNISGDR
QTMLFSATMPAPIKKLASNYMKKEVKHIAIIKNSLTVERIQQFYFEVKNKDKFEALCRVI
DVEEPGITIIFCRTKRGVDELVESMQFRGYNVEGMHGDMSQNQRINTLKKFKENNIDFLV
ATDVAARGIDVHNVSHVINYDIPQDMESYVHRIGRTGRANAEGIAYSLVTPREYVMIKQI
EKFTKSKIRRKEIPTIDDIFETKYNSLTDKIRTNIEKNDFNKYIPFVQKLDDEFNLVDVS
AALVKMIFDKEMGFDYSGNDNDKLKNDESVRLFFSAGRKDKLSVKKLLEFIDKSSGVEGS
EIGDIDILDKFTFVDVPDRLKDVIIKNCSGKKLSGRKISIEVAKSKKKSK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaaatttagcgatttaaagttgaacagcagtgttttgaaggcaatagat
gatatgggctttgaggaaccatctaatatacaggcagaagccattccggttgttatagac
ggatatgatatgataggtcaggctcaaacaggaacgggaaaaacagttgcatttggagca
ccaataataagtaaaataaaggatatcaatgaaagagaaggagttcaagcaataatatta
actcctacaagagaactcgctattcaaataactgatgaattaacaagattatcaaagtat
gcaagagttagaatattaccaatatatggtggccaatcaatagaaagacaaatgagagcc
attaaaagaggagtagatgttatagttgcaactcctggtagaataatggatcatataaaa
agaaaaacagtaagattggataaggttaagtttttagttcttgacgaagcagatgaaatg
cttgatatgggattcatagatgacatagagggaataataaagaacataagtggtgatagg
caaacaatgctattctcagctacaatgccagctccaataaaaaaattagcttctaattat
atgaaaaaggaagttaagcatatagcaataataaaaaattctttaacagttgaaagaata
caacaattctattttgaagtaaaaaataaagataagtttgaagcattatgtagggtaata
gatgttgaagaaccaggaattaccattatattttgtaggacaaaaagaggcgtagatgag
ttagttgaatcaatgcaatttagaggctataatgttgagggaatgcatggtgatatgagc
caaaatcaaagaataaatactcttaaaaagttcaaggaaaataatattgactttttagtg
gcaacagatgtagctgcaagaggtatagatgtacataatgtatcacatgtaataaattat
gatatacctcaagatatggagtcatatgttcatagaataggaagaactggaagagcaaat
gcagagggaatagcatattcattagtaacaccaagagaatatgttatgattaagcaaatt
gagaagtttacaaagagtaagataagaagaaaagaaatacctacaatagatgatatattt
gaaactaaatataatagcttaacagacaaaataagaactaatattgaaaaaaatgacttt
aataagtatattccgtttgtgcaaaagcttgatgatgaatttaatttagtagatgtatca
gcagctttagttaaaatgatcttcgataaagaaatgggttttgattattcaggtaatgat
aatgataaacttaaaaatgatgaaagtgttagattattctttagtgcaggaagaaaagat
aaattatcagttaaaaaacttcttgaatttatagataaatcatcaggtgttgaaggtagt
gaaataggtgatatagatatacttgataaattcacttttgttgatgttccagatagattg
aaggacgttataataaaaaattgtagtggcaagaaattgagtggaagaaaaataagtata
gaagtagctaagtcaaaaaagaaatctaaataa
DBGET
integrated database retrieval system
