Clostridium felsineum DSM 793: CLAUR_020880
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Entry
CLAUR_020880 CDS
T08241
Symbol
rlmCD_2
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
caun
Clostridium felsineum DSM 793
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caun03009
]
CLAUR_020880 (rlmCD_2)
Enzymes [BR:
caun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CLAUR_020880 (rlmCD_2)
Ribosome biogenesis [BR:
caun03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLAUR_020880 (rlmCD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_11
TRM5-TYW2_MTfase
MTS
PrmA
UPF0020
N6_N4_Mtase
Ubie_methyltran
CSD2
Methyltransf_32
HMGL-like
GDH_ACT3
FtsJ
DUF2023
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
URZ02091
LinkDB
All DBs
Position
complement(2344836..2346218)
Genome browser
AA seq
460 aa
AA seq
DB search
MDKVVPVKKNNDYEIYIDDFGNMGEGIGKVDNFTVFVKGAVKGEKVKAKIIKVNKNFAIG
KLIDVIEKSEDRAEPVCSIYNKCGGCQLQHLKYEKQLEFKKNKVTECLRRIAKVDLSTVK
INETIGMETPNYYRNKVQLPVGEVNGEVKIGFYRERSHDIIEVDKCFIQDDTANEIMLVV
KKWIKDFNIEAYNEALGKGVLRHIMIRKAFKTGQIMLVLVTNTEKLPQKKELIHRITTEI
KGIKGIIQNINNKKTNVVLGQREITLWGENIIEDYIGEFKFNVSSKSFFQVNPVQTEKLY
ETALRFAGLTGNEVVFDAYCGTGTISLFLSQKANKVYGVEMVPEAIENAKINAQQNGVDN
AEFIVGKAEEEIPKLIEKGIKPEIVVVDPPRKGCEKALLESIASGEPRTIVYVSCDPATL
SRDLAILNELGYEVKEVQPVDMFPETGHVETVVMMSKVDK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggataaagttgtaccagttaaaaaaaataatgattatgaaatttacatagatgatttt
ggaaatatgggagagggtattggtaaagttgataattttactgtatttgtaaaaggtgca
gttaaaggggaaaaagtaaaggcaaaaataataaaggttaataaaaactttgcaatagga
aagttaatagatgtaattgaaaaatcagaagatagggctgagccagtgtgttcgatttat
aataaatgtggtggatgtcaacttcaacatctaaaatatgaaaagcaacttgaatttaag
aaaaacaaagtaacagaatgtcttagaagaatagcaaaagtggatttaagcactgtaaaa
ataaatgagacaattggtatggaaactccaaactattacaggaacaaggttcaacttcct
gtgggagaggttaatggagaagtgaaaattggtttttacagagaaagaagtcatgacata
atagaagttgacaaatgttttatacaggatgatactgcaaatgaaataatgcttgtagta
aagaagtggattaaagattttaacatagaagcatataatgaagctttaggtaaaggtgtt
ttgaggcatataatgataagaaaagcctttaaaacaggacaaataatgttagttttagta
acaaatactgaaaagcttccacaaaagaaagaacttatccacagaataactactgaaatt
aagggtataaaggggataattcaaaatattaataataagaaaactaatgtggtattagga
caaagagaaataactctttggggtgaaaatattatagaggattacataggagagtttaaa
tttaatgtttcatctaaatcattttttcaagtaaatccagttcaaactgaaaagctttat
gaaactgctttaaggtttgcaggacttacaggtaatgaagtagtatttgatgcctactgc
ggaacaggtacgatttcattatttttatcacaaaaggcaaataaggtttatggagtagaa
atggtgccggaagcaatagaaaatgctaagataaacgcacagcaaaatggtgtggataac
gccgaatttatagttggaaaagctgaagaggaaataccaaagcttatagagaagggcata
aagccagaaatagtagtggtagatccgccaagaaaaggctgtgagaaggcattacttgaa
tctatagctagtggagagcctagaactatagtttatgtttcttgtgatccagcaacttta
tcaagggatttagcaatattaaatgaacttggatatgaggttaaagaagttcagccggtg
gatatgttcccagagactgggcacgttgagacggtagtaatgatgtcaaaggttgataaa
taa
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