Clostridium felsineum DSM 793: CLAUR_020950
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Entry
CLAUR_020950 CDS
T08241
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun03030
DNA replication
caun03430
Mismatch repair
caun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAUR_020950 (dnaE)
03430 Mismatch repair
CLAUR_020950 (dnaE)
03440 Homologous recombination
CLAUR_020950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caun03032
]
CLAUR_020950 (dnaE)
03400 DNA repair and recombination proteins [BR:
caun03400
]
CLAUR_020950 (dnaE)
Enzymes [BR:
caun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLAUR_020950 (dnaE)
DNA replication proteins [BR:
caun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLAUR_020950 (dnaE)
DNA repair and recombination proteins [BR:
caun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLAUR_020950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
URZ02098
LinkDB
All DBs
Position
complement(2352763..2356254)
Genome browser
AA seq
1163 aa
AA seq
DB search
MEAEFKDFVHLHVHTEYSLLDGSGKVKKLVKRAKELGMKSIAITDHGAMYGCVEFYKAAK
EVGIKPIIGCEIYVAGKSMHIKHPDAENETYHLVLLVKNEVGYKNLMEIVSKASIDGFYY
KPRVDHDYLMSHSEGLIASSACFGGEVQSYILKDNLERAKKAALFYKETFKEGFYLELQY
HALKNDMKVNDALVEMSKELDIPLIATNDVHYINKEDSIAHDVLLCIQTGKTVDEENRMR
YAPEQFYLKSQEEMYEQFSYVKDALLNTSKIADQCNFEYKFHESKLPNFPLKEGTDHYEY
LKDLCYEGLRERYNDITDTIIERLEYELGIIKEMGYVDYFLIVWDFIKFARENGVPTGPG
RGSAAGSIVAYTLGITKIDPIKYSLIFERFLNPDRVSMPDIDSDFCYENRQKVIDYVVEK
YGKDSVSQIVTFGTMAARLCIRDVGRAMNYSYGEVDRIAKMIPNVLNITIDKALEMNPEL
KAVYDDDERIKDLIDISRKLEGLPRHTSTHAAGVVIASQPLVNYVPLLKNEESIVAQFTM
GILEELGLLKMDFLGLRTLTVINDTIKMVKQNRNIDIDIDSIDFDDAGVYKMIGEGKTVG
VFQLESAGMTSFMKELKPDSLEDIIAGISLYRPGPMNEIPRYIRNKNNPEEIKYVTPELK
HILDVTYGCIIYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHHVMEEERHNFIHGVVDE
NGKVEVPGCIKNGISEKIANEIFDSMMDFASYAFNKSHAAAYAVVAYETAYLIHYYPAEY
LAAMLNSVMGNNEKVAFYIRCAEELKIQVLPPDINESYSRFTVKGDTIRFGLAAIKNVGV
NVIESIVRSRQKKGSFNSFTDFCNKIDTSEVNKRAVESIIKAGGFDTLEIYRSQLLAVFE
KIMDGISGQRKKNIKGQMNLFTDFAQDEYEEVEIQYPDIKEFDKKYLLAMEKEMTGLYLS
GHPLEDYEETLKNMTSIKISDIVAEQSLEDDEIKVDETSGIEDGTRVIIGGIISSVTKKI
TKSNTMMAFIRVEDMYASIEVVIFPKILEKNSTYIKEDEMVIIKGRINKREDEQPKVICE
EIMPIVKSTEKIYILVEDDAAVKNSIKEIKKMLTLYTGDTPIYMCTRKERKKFLIDRALW
VQKEVDLIKFLTDKFGESNVKVL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaatttaaagattttgttcatcttcatgtccataccgaatacagtctcctt
gatggttccggtaaggttaaaaaactagttaagcgtgcaaaagagctcggcatgaaaagt
attgcaataacggaccatggtgcaatgtatggatgtgtggagttttataaggccgcaaaa
gaagtaggcataaaacctataatagggtgtgaaatttatgtagcaggtaagtctatgcat
ataaagcatcctgatgctgaaaatgaaacctatcatttggttttgcttgttaagaatgaa
gttggctacaaaaatttaatggagatagtatctaaggcatctattgacggtttttattat
aaaccaagagtagatcatgattatttaatgagtcatagtgaaggactgatagcttcaagt
gcatgttttggaggagaggttcaatcttatatattaaaagataatcttgaacgtgcaaaa
aaggcagcacttttttataaggaaactttcaaagaaggcttttacttagaacttcaatat
catgcacttaagaatgatatgaaggttaatgatgctttagtagaaatgtcaaaagagctt
gatataccacttatagctactaatgatgttcattacataaataaagaagattctatagca
catgatgtacttttatgtatacaaacaggtaagactgttgatgaagaaaatagaatgagg
tatgctcctgagcaattttatcttaaaagtcaagaggaaatgtacgaacagttttcttat
gtaaaagatgcattactcaatacttctaaaatagctgatcaatgtaattttgaatataaa
tttcatgaatcaaagcttccaaattttcctcttaaagaaggaacagatcactatgagtac
ctaaaggacttatgttatgaaggcttaagagaaagatataatgatattacagatactatt
atagaaagattagaatatgagcttggaataataaaagaaatgggatatgtagattacttt
ttaatagtttgggattttattaagtttgcaagagaaaatggagtgccaactggaccaggt
agagggtctgctgcgggatcaattgttgcatatactcttggaataaccaagatcgaccca
attaagtatagtcttatttttgaaagatttttaaacccagacagagtttctatgcctgat
attgatagtgatttttgctatgaaaatcgccaaaaggtaatagattatgtggttgaaaag
tatggtaaagattctgtttctcaaattgtaacctttggaacaatggcagcaagactttgt
ataagagacgttggaagagctatgaattattcttatggtgaggttgatagaatagctaaa
atgattcctaatgttctaaatataactattgataaggctctagagatgaacccagagctt
aaagctgtatatgatgatgatgagagaataaaggatttaatagatatatcaagaaaacta
gaagggcttccaaggcatacctcaactcatgctgctggagttgtaatagcttcccagcca
cttgtaaattatgttccgcttttgaaaaacgaggaatctatagtagctcaatttactatg
ggcatacttgaagaacttggacttttaaagatggacttcttaggtttaagaactcttaca
gttattaatgacacaataaaaatggttaaacaaaatagaaatatagatatagacatcgat
agcatagattttgatgatgctggcgtatataagatgatcggtgaaggtaaaactgtagga
gtatttcagcttgaatctgcaggtatgactagttttatgaaagaacttaagccagatagt
ttagaggatataatagcgggaataagtctttatagaccaggtcctatgaatgaaatacca
agatatataagaaacaaaaataatcctgaagaaataaaatatgttactccagagcttaaa
catattttagatgtaacttatggatgtataatatatcaagaacaggtaatgcagatagta
agggacttagcagggtactcaatgggaagaagtgaccttgtaagacgtgctatgtctaag
aaaaagcatcatgttatggaagaagaaagacataactttatacatggagttgttgatgaa
aatggtaaagtagaagtaccaggatgtataaaaaatggaatttctgaaaaaatagctaat
gagatatttgattccatgatggattttgcaagttatgctttcaacaagtcacatgcggct
gcctatgcagtggttgcctatgaaacagcgtatttaattcattattatccagcagaatat
ttagcagctatgcttaacagtgttatgggtaataatgaaaaagtagctttttatataagg
tgtgcagaggaattaaaaatacaggttttacctccagacataaatgaaagttattcaaga
tttacagtaaagggggataccataagatttggtcttgctgctattaaaaatgtaggagtt
aatgtaatagagagcatagtaagatcaagacagaaaaagggtagctttaattcctttacg
gatttttgtaataaaattgatacctcagaggtaaacaaaagagcagttgagagtataata
aaagcaggagggttcgatacacttgaaatttataggtcacaacttcttgctgtgtttgaa
aaaataatggatggaatttcagggcagagaaagaaaaatataaaaggtcagatgaattta
tttacggactttgcacaagatgagtacgaggaagttgaaattcagtatccggatataaaa
gaatttgataaaaagtatttacttgcaatggagaaggaaatgacaggattatatctttca
ggtcatccccttgaagattatgaggaaactttgaaaaatatgaccagcataaaaatatca
gatatagtggcagaacaatccttagaagatgatgaaataaaggtagatgaaacttcagga
attgaagatggaacaagagttataatcggtggaataataagttctgtaactaaaaaaatt
actaaaagtaatacaatgatggcattcataagagtagaagatatgtatgcttcaatagag
gttgttatatttcctaaaatactagaaaaaaattctacctacataaaggaagacgaaatg
gtgataataaaaggtagaataaacaaaagagaagatgagcagcctaaagtaatatgtgaa
gaaataatgccaattgttaaaagtacagaaaaaatatatatacttgttgaagatgatgct
gctgttaaaaattcaataaaagaaataaaaaaaatgcttactttatatactggagatacc
ccaatatatatgtgcacaaggaaagaaagaaaaaagtttcttatagatagagctctttgg
gttcaaaaggaagttgatttaattaaatttttaacagataaatttggcgaaagtaatgta
aaagtgttataa
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