Clostridium felsineum DSM 793: CLAUR_040920
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Entry
CLAUR_040920 CDS
T08241
Name
(GenBank) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLAUR_040920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caun03400
]
CLAUR_040920
Enzymes [BR:
caun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLAUR_040920
DNA repair and recombination proteins [BR:
caun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLAUR_040920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
CAMSAP_CKK
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
URZ04026
LinkDB
All DBs
Position
4479603..4480481
Genome browser
AA seq
292 aa
AA seq
DB search
MDFDMIEEIENGIVIKNVKSFELKDIFDCGQCFRWKREDNGNYIGVALEKVIEVEKRQDD
VVMYNISEKEFKNVWSDYFDLYRDYSEIKEELSKDPLLKKSVDFGSGIRILKQDSFEMLL
SFIISANNRIPMIKKCINNISERAGKKLQYKGETYYAFPTVDELHDFTEKDFEECTAGFR
AKYLKDTVDRIYNGEFNLHYIKSLDDDKCHEELKKIMGVGPKVADCIMLFSMQKYSAFPV
DTWVKKAMMSLYVAPDVSLKKIRDFGREKFGDLSGFAQQYLFYYARENNLKL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatatgattgaagaaatagaaaatggaattgtcataaaaaatgtaaaaagc
tttgagcttaaggatatatttgattgcggtcaatgttttaggtggaagagagaagacaat
ggaaactatataggagttgcccttgagaaagtaatagaagttgaaaaaagacaagatgat
gttgttatgtacaacattagtgaaaaagaatttaaaaatgtgtggagtgactactttgat
ttgtatagagattacagtgaaataaaagaggaattgagtaaggatcctctattaaaaaaa
tcagtagatttcggatcaggaataagaattttaaaacaagattcatttgaaatgctttta
tcatttataatttcggcaaataatagaataccaatgataaagaaatgtataaataacata
agtgagagggcagggaagaagcttcaatataaaggtgagacatattatgcctttcctaca
gtagatgagcttcatgactttactgagaaggattttgaagaatgtacggcaggatttagg
gctaagtatttaaaagatacagtagacaggatatataatggagagtttaatttacactat
ataaaaagtttggatgatgataaatgtcatgaagaacttaaaaagattatgggagttgga
cccaaggttgctgattgtataatgcttttttcaatgcaaaagtactcagcattccctgta
gatacctgggtaaagaaggctatgatgagtctttatgttgcaccggatgtatctttgaaa
aaaataagagactttggaagagaaaaatttggagatttatcaggttttgcacagcagtat
ttattttattatgcaagagaaaataatttgaagttataa
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