Candidozyma auris: CJI96_0000025
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Entry
CJI96_0000025 CDS
T04850
Name
(RefSeq) transcription_elongation_factor_SPT6
KO
K11292
transcription elongation factor SPT6
Organism
caur
Candidozyma auris
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caur03021
]
CJI96_0000025
03036 Chromosome and associated proteins [BR:
caur03036
]
CJI96_0000025
Transcription machinery [BR:
caur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CJI96_0000025
Chromosome and associated proteins [BR:
caur03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CJI96_0000025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_9
Motif
Other DBs
NCBI-GeneID:
40026899
NCBI-ProteinID:
XP_028892382
LinkDB
All DBs
Position
1:49593..53918
Genome browser
AA seq
1441 aa
AA seq
DB search
MSLEQEQDALLKEESEIRIDASDNNSSEEGDDVMDDSSEEEDDDNDEEAMQKVREGFIVD
DDEDDEISRKKRRKHKRKREKERSQDEPNDALDEDDLELLRENAGEAPSKPSQNKFKRLK
RAAGEEDGVEDGLAEDSTAAKPRDRLTDFFSDDEEDDVGEAVGGEENVRGRDEGNILDEF
EDFIEEDEYSDEEEAKAHKLQQQRERAKRKGPKLDTSKLSSVDRESLQQLFEVFGNGADY
DWALEAQDLEDEGNNEQEPTALDEVFEHSELKDRMLTEEDNLIRIIDVPERFQKYRANLN
YMDLEGVELQREKKWVADILFTEKRQTYDGPLKEPFYEAVGKVVEFISKDNWEVPFICAH
RRDFLIHTEEIQEPDGSVRNTVHKLLFEDDLWRIVRLDIEYHTLYEKRVNTEKLINELSL
DDDLVKDIQSADSMVAVQDLQDYINFTYSAEIKKLNDSKEQEQDGQEDEDRKSGKKHSRY
AIFERIRENVLYDAVKGYGISAKEFGENVQDQSLKNYEVPYRIHATDDSYETPEDMIERL
VEDDEILFKDPKNALSAVRKTFAEEIFHNPKIRSEVRQVYKNFASISVALTEKGRSSIDS
HSPYALIKYAKGYSPADLVSRPDVFLKMLAAEANGLIVLKIETSDYDSWFQSILNCLTSD
GTSEVSEKWNKEREITLSMAFKRLTSMVAMNTKEDLRRECERLVAAELRTRFLAKVDQAP
FTPFGYDKGTKPNVLALSFGKGDFDSAVVGAFVRDNGRISEYFKSENNPTRDRESGERFM
GQLKEFFDTRLYNHKPDVIVVSGYSANTKRLFDVIKNFVSKYEILCNVEDLQDPATPPLL
PVIWGQDETARLYQNSERAVLELSDKPPLVKYCVGLAKYVQSPLLEYVSLKENIMSLTFY
EHQKLLPEDAILEAFDTVFVDIVNMVGVEINEALRDPYYAQLLPYVAGLGPRKASGLLRN
ITAKLGTLTTRSDLIENELSTANIFFNCSSFLSIPYDEGVTVMDSSIELLDATRIHPEDY
SLARKMAADALDLDEEDMAHIDEQGGIIYQLMQEGVNKVDDLNLTAFGKELESKFGKKKY
ATLQSIKEELVNNFEELRRSFHLLDLIEVFRMLTGESAETFNRGTICPVTINRVGKNFRD
ENARVKFLRVSTPSQISGTVEEGHILKNSDYQQGDVIQVVVLDVNYESFSATFSALPEDI
KKASGPKFFKDPAKWDFQQEEADRQKEKAKENAKLAKTRNVQHPLFHNFNARQAEEYLAP
QAVGDCVIRPSSRGPEYLTATWKVANNLFQHLSVKEITHNAGKEYVVEGKKYADLDQMVF
QHVQAIAKHVNEMCRHPKFREGTLQEVHEWLESYTKANPKNSAYVFCYDHKAPGWFLLLF
KVNVKTPVTTWHVKTECNGFVLKGFSYPNMMRLCNGFKQTFKSLVNDKSRGHSQPYGGYG
Y
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggagcaggagcaagatgctcttctaaaagaggaaagcgagatccgcattgac
gcttcagacaacaattcgtcagaggaaggcgacgatgtcatggacgactcttcagaagaa
gaagatgacgataacgatgaagaagcgatgcagaaagtcagagagggctttattgttgac
gatgacgaagacgacgaaattctgcgcaagaagagaagaaagcataaaagaaagagagag
aaggagaggagccaggatgagcctaacgatgcgctagatgaagacgacttagagcttctc
agagaaaatgccggtgaggcgccactgaaaccatcgcagaacaagtttaaacgtctcaaa
cgagccgctggtgaggaagatggcgtggaagatggattggccgaggacagtacggctgcg
aaaccaagagacaggctaactgactttttctctgatgatgaagaggacgatgttggcgaa
gcagtgggtggcgaggaaaacgtacgtggcagagacgagggcaacatcttggacgagttt
gaagatttcattgaggaggatgaatactcggacgaagaagaggccaaggcacacaagttg
cagcagcagagagaacgggcaaagagaaagggtccgaagttggacacactgaagctctcg
agcgtcgacagggagagtttgcagcaattgtttgaagtctttggcaatggtgcagactac
gactgggcgttggaagcacaggatcttgaggatgaaggtaacaacgagcaagagcctaca
gcattggatgaggtgttcgagcattccgaattgaaggatcgaatgctcacagaggaagat
aatttgattcgtatcattgatgtgccggagagatttcagaagtacagggctaacctcaac
tacatggacttggagggtgtggaattgcagcgtgaaaagaagtgggttgccgacattttg
tttacagaaaagcgccagacgtatgacgggccactcaaggagcccttctacgaggcggtg
ggcaaagtggtggaattcatttctaaagacaattgggaggttcccttcatctgcgctcac
agacgtgacttcttgatccacaccgaagaaatacaagaaccggacggatctgttcgcaac
acagtgcataagttgctttttgaggacgacttgtggcgtatagtgcgtctagacatcgag
taccacactctctacgagaagagagtcaatacagaaaagttgatcaatgaattgagcctt
gatgacgacctagtgaaggacatccaatccgctgacagcatggtagctgttcaggattta
caggactacatcaacttcacctactctgctgaaatcaagaagcttaacgacagcaaagaa
caggaacaggatggccaggaagatgaagataggaaactgggcaagaaacactcaagatat
gccatctttgagcgtatcagagaaaacgtcttgtacgacgccgtcaaaggatatggtatc
tctgcaaaagagttcggagaaaacgtccaggatcaatctctcaaaaattacgaagtccct
tatagaattcacgctacggacgactcgtatgagactccagaggatatgatcgagaggctt
gttgaggacgacgaaatattgttcaaggaccctaagaacgccttgagtgccgtgagaaaa
actttcgccgaagagatctttcacaaccctaagataagatctgaggtcagacaagtctat
aaaaactttgcatccatctcagtcgcattaaccgaaaaaggtcgttcaagtattgacagt
catagcccctacgcccttattaaatacgctaaaggctactctcctgctgacttggtgagc
agacctgatgtcttcctcaaaatgcttgccgccgaagcgaatggattgattgttctaaag
atcgaaacttccgattacgacagctggttccagtctattctcaattgtttgacctcggat
ggaacatctgaagtttctgaaaaatggaacaaggagagagaaatcactttgtccatggct
ttcaagcgtttgacttctatggtggcaatgaatacaaaggaggacttacgtcgtgaatgc
gagcgtcttgtcgcagctgagctcagaaccagattcttggccaaagtggatcaggcgccg
ttcactcccttcggttacgataagggaaccaaacctaacgttttggcattgtctttcggc
aaaggtgacttcgacagcgccgttgttggagcatttgttagagacaatggaagaatcagt
gaatacttcaaatctgagaataatccaacaagggacagagaaagcggtgaacgtttcatg
ggtcagctcaaggaattcttcgacacaagactttataaccacaagccagatgtcatcgtt
gtttctggatacagcgctaatactaagaggctctttgatgtgatcaagaactttgtttca
aagtacgaaattctctgcaatgtcgaagatctacaagatccagctacgccacctttgctt
cctgtaatatggggacaggacgagacggcgagattatatcaaaattcagaaagggccgtc
cttgagctctccgataagcctcctttggtcaagtactgtgtgggtttagcaaagtatgtt
caaagtcctttattggagtacgtttctcttaaagaaaacataatgtcattgacattttat
gagcatcaaaaacttctccctgaggatgctattctagaggcatttgacacagtgtttgtt
gatatcgtcaatatggtgggtgttgagatcaacgaggcactccgtgacccgtattatgcc
cagcttctaccctatgttgctggtctaggtcccagaaaagcttccggcttattgagaaat
ataactgctaaactcggcactttgaccacaagaagtgacttgattgagaacgaactctct
acagcgaacattttcttcaactgctcgtcatttttgagcattccatatgatgaaggagtt
actgtcatggactcctccattgagttgctcgatgccactcgtatacatcctgaggactac
agtttggccaggaaaatggctgccgacgcgctcgatttggacgaggaggacatggctcat
attgacgagcaaggtggtattatctaccagttgatgcaagaaggtgtgaacaaggtcgat
gacctaaacttgactgcttttggtaaagagttggaatctaagttcggcaaaaagaaatac
gccacccttcaaagtatcaaggaagagcttgttaacaactttgaggaattgagaagatca
ttccatctccttgatctcatcgaggtgttcagaatgttaactggtgaaagcgctgaaacc
ttcaacagaggcacaatctgtccggtcactattaaccgtgtgggtaagaatttccgtgac
gagaatgcaagagttaagttcttgcgagtctcgacgccgtctcagattagtggtacagtt
gaggaaggtcacatattgaagaattcagactatcaacaaggcgatgtcattcaggttgtc
gttttggacgtcaactacgagtctttctcagcaactttcagtgcgcttcctgaagacata
aagaaagcgtcaggaccgaaatttttcaaggatcctgcaaaatgggactttcaacaggaa
gaagcagacagacagaaagaaaaggcaaaagagaatgctaagcttgccaaaaccagaaat
gttcagcacccattatttcacaacttcaatgcaagacaagcagaagagtacttggcacca
caggctgtcggtgattgcgtgattcgtccatcatccagaggcccagagtacttgactgca
acttggaaagtcgcaaacaatttattccagcacctcagtgtcaaggaaatcactcacaat
gctggaaaagagtatgtggttgagggcaaaaaatacgctgacttggatcaaatggtgttc
cagcatgttcaggccattgccaagcatgtgaatgaaatgtgccgtcatccaaagttccgt
gagggtacccttcaagaggtccatgagtggttggaatcgtacaccaaggccaatcctaag
aacagtgcctacgttttctgttacgaccataaggcaccagggtggttcttgcttctattc
aaggtcaatgtgaagacgccagtgacaacgtggcacgtgaagacagaatgcaacgggttt
gtgttgaaggggttctcgtaccccaacatgatgagattatgtaacggtttcaagcaaaca
tttaagagtcttgtcaatgacaagtctaggggtcacagtcagccttacggaggttacggc
tactaa
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