Candidozyma auris: CJI96_0000121
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Entry
CJI96_0000121 CDS
T04850
Name
(RefSeq) hypothetical_protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
caur
Candidozyma auris
Pathway
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0000121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caur03041
]
CJI96_0000121
Spliceosome [BR:
caur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CJI96_0000121
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
PRP4
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_2nd
WD_LRWD1
WD40_RFWD3
DHFR_2
Motif
Other DBs
NCBI-GeneID:
40026801
NCBI-ProteinID:
XP_028892286
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Position
1:complement(256289..257731)
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AA seq
480 aa
AA seq
DB search
MQNDEIPVVNDPRTLKRNIEVTDVPTIDSEVRTVLRKLGEPITFFGEGPSERRERLLRFL
QERPHTNIEFAEIEQTEDESMASEDEDDDEEFYTPGSEELEDARKKILKYSVDRAIARVN
KEKEEAKTYDSFKVLKHRRYINSTLGDYELNGTDVLKGNTRAISVVRANCDDTVIACGSW
DGNVYLLKRDEENLLSQKGKSGSGYHTEKVSALDWHPTDSTILATGGAEGYVNLWRYNED
EIVKPQLKLKASERRVPKVAFHPSGHYLASTSFDQTWKFWDIEKELELVEQEGHSKEVYA
CAIHPDGSLIATGDLDGVGRVWDLRSGRSIAVLNGHIQGLYSMDWSPNGQHLASASGDCS
VKIWDMRKLTSVNVDTQLFSIPAHTKLVSEVRFFQNNSGPLAIAVTDESDENPSTLNVAG
TFLATSSYDGTVKLWSADNWINVSTLKGHNDKVMSCDIGKQGTYIVSCGWDRTVKTWCKL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgacgaaattccggtcgtgaacgatccccggaccttaaaaagaaacattgag
gttacagatgtgcccacaatagatagtgaagtgaggactgttctcaggaaattgggggaa
cccatcacattctttggagaagggccatctgagagacgagagcgtctactacgatttttg
caagagcgaccccacacaaacattgaattcgctgaaatagaacagactgaagatgagagt
atggcatcagaagatgaagatgacgatgaggagttttacacgccgggcagcgaggagcta
gaagatgctcgcaagaagattctaaagtactcggtagaccgtgcgattgccagagtaaac
aaagagaaggaggaggcaaagacgtatgattcgtttaaagttctcaaacacaggcgttac
atcaacagtacattaggcgattatgaattgaacgggacagatgttcttaaaggcaatacc
cgtgcaatatcggttgtgagagccaactgcgatgacacggtgatcgcatgcgggtcatgg
gatgggaacgtttaccttctcaaaagggacgaggagaatttactctctcagaagggaaag
tcgggaagtggataccatacggagaaagtcagtgctctagattggcaccccaccgactct
accattctcgctactggtggtgcagaaggttatgttaatctatggaggtataatgaagat
gagattgtcaaacctcaactcaaactcaaagccagtgaaagaagggtaccaaaggttgca
ttccatcccagcggtcactatttggcgagcacatcgtttgaccaaacgtggaagttttgg
gatatcgagaaagaactagaacttgttgagcaagaaggtcattccaaggaggtctatgcg
tgtgccattcatcccgacgggagcctcatagcaacaggtgatcttgatggtgttggcaga
gtatgggatttgagatcagggagatctattgctgttctcaatggccacattcagggctta
tattctatggactggtcaccaaacggtcagcatctcgcatcagcaagtggtgattgttca
gtcaaaatatgggatatgcggaagctcaccagtgtcaacgtagatacccagttgtttctg
atcccagcgcacactaagctagtaagcgaggttagattctttcaaaataatctgggccca
ttggcaattgcagtgacagacgaaagtgacgaaaacccttcgaccctaaacgttgcggga
acgttcttagccacgagctcttatgacgggacggtaaaactatggtcggcagataactgg
ataaacgtgctgacacttaaaggtcataatgataaggtaatgagctgtgatattgggaaa
cagggaacgtacattgtgagttgtggatgggaccgcacagtcaagacctggtgtaaattg
tag
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