KEGG   Candidozyma auris: CJI96_0000121
Entry
CJI96_0000121     CDS       T04850                                 
Name
(RefSeq) hypothetical_protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
caur  Candidozyma auris
Pathway
caur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CJI96_0000121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caur03041]
    CJI96_0000121
Spliceosome [BR:caur03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CJI96_0000121
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd PRP4 Beta-prop_Vps41 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd WD_LRWD1 WD40_RFWD3 DHFR_2
Other DBs
NCBI-GeneID: 40026801
NCBI-ProteinID: XP_028892286
LinkDB
Position
1:complement(256289..257731)
AA seq 480 aa
MQNDEIPVVNDPRTLKRNIEVTDVPTIDSEVRTVLRKLGEPITFFGEGPSERRERLLRFL
QERPHTNIEFAEIEQTEDESMASEDEDDDEEFYTPGSEELEDARKKILKYSVDRAIARVN
KEKEEAKTYDSFKVLKHRRYINSTLGDYELNGTDVLKGNTRAISVVRANCDDTVIACGSW
DGNVYLLKRDEENLLSQKGKSGSGYHTEKVSALDWHPTDSTILATGGAEGYVNLWRYNED
EIVKPQLKLKASERRVPKVAFHPSGHYLASTSFDQTWKFWDIEKELELVEQEGHSKEVYA
CAIHPDGSLIATGDLDGVGRVWDLRSGRSIAVLNGHIQGLYSMDWSPNGQHLASASGDCS
VKIWDMRKLTSVNVDTQLFSIPAHTKLVSEVRFFQNNSGPLAIAVTDESDENPSTLNVAG
TFLATSSYDGTVKLWSADNWINVSTLKGHNDKVMSCDIGKQGTYIVSCGWDRTVKTWCKL
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgcaaaacgacgaaattccggtcgtgaacgatccccggaccttaaaaagaaacattgag
gttacagatgtgcccacaatagatagtgaagtgaggactgttctcaggaaattgggggaa
cccatcacattctttggagaagggccatctgagagacgagagcgtctactacgatttttg
caagagcgaccccacacaaacattgaattcgctgaaatagaacagactgaagatgagagt
atggcatcagaagatgaagatgacgatgaggagttttacacgccgggcagcgaggagcta
gaagatgctcgcaagaagattctaaagtactcggtagaccgtgcgattgccagagtaaac
aaagagaaggaggaggcaaagacgtatgattcgtttaaagttctcaaacacaggcgttac
atcaacagtacattaggcgattatgaattgaacgggacagatgttcttaaaggcaatacc
cgtgcaatatcggttgtgagagccaactgcgatgacacggtgatcgcatgcgggtcatgg
gatgggaacgtttaccttctcaaaagggacgaggagaatttactctctcagaagggaaag
tcgggaagtggataccatacggagaaagtcagtgctctagattggcaccccaccgactct
accattctcgctactggtggtgcagaaggttatgttaatctatggaggtataatgaagat
gagattgtcaaacctcaactcaaactcaaagccagtgaaagaagggtaccaaaggttgca
ttccatcccagcggtcactatttggcgagcacatcgtttgaccaaacgtggaagttttgg
gatatcgagaaagaactagaacttgttgagcaagaaggtcattccaaggaggtctatgcg
tgtgccattcatcccgacgggagcctcatagcaacaggtgatcttgatggtgttggcaga
gtatgggatttgagatcagggagatctattgctgttctcaatggccacattcagggctta
tattctatggactggtcaccaaacggtcagcatctcgcatcagcaagtggtgattgttca
gtcaaaatatgggatatgcggaagctcaccagtgtcaacgtagatacccagttgtttctg
atcccagcgcacactaagctagtaagcgaggttagattctttcaaaataatctgggccca
ttggcaattgcagtgacagacgaaagtgacgaaaacccttcgaccctaaacgttgcggga
acgttcttagccacgagctcttatgacgggacggtaaaactatggtcggcagataactgg
ataaacgtgctgacacttaaaggtcataatgataaggtaatgagctgtgatattgggaaa
cagggaacgtacattgtgagttgtggatgggaccgcacagtcaagacctggtgtaaattg
tag

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