Candidozyma auris: CJI96_0000700
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Entry
CJI96_0000700 CDS
T04850
Name
(RefSeq) U2 snRNP complex subunit RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
caur
Candidozyma auris
Pathway
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0000700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caur03021
]
CJI96_0000700
03041 Spliceosome [BR:
caur03041
]
CJI96_0000700
03036 Chromosome and associated proteins [BR:
caur03036
]
CJI96_0000700
Transcription machinery [BR:
caur03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CJI96_0000700
Spliceosome [BR:
caur03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CJI96_0000700
Complex B
CJI96_0000700
Complex C
U2 SnRNP specific factors
CJI96_0000700
Chromosome and associated proteins [BR:
caur03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CJI96_0000700
TFTC complex
CJI96_0000700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
40028063
NCBI-ProteinID:
XP_028890171
LinkDB
All DBs
Position
1:complement(1524980..1528621)
Genome browser
AA seq
1213 aa
AA seq
DB search
MIPDDTLCLYNLTLKQPSSPFQSIVGQFSGVKKVEELVLISTTIIEVYQPKADTGKLNKV
SSQPVFGIIQKCTKLRLLETQKDVLVLTADSGNIIIATLNDETKKFEPLIQEPHSKNGLR
RIFPGEYLSSNPQNRAIMIGALERTKFVYRVEMEHGTGQLKLSSPLESYSPGFLTVDLCP
LDTSYENPLWAAIEVDTSEFEEKKYVTSESPSQLRYYELDQGLNHIVQKKSKSTIPAHAS
LLIPVPGHIGGVLIVCDSYIIYEKGPESERLYLSLPRRNGSDTTAIVCFCSHILKKTDFF
VLMQSSLGDLFKLTFDYNKDTEQVNSLSVTYFDTIPVCNTINIIRAGFMFANVANDSKLL
YQFEKLGEENETTSRSSSKITTVEECGMFSPRGLENLALVDILETLGPIASSETVQQRSQ
KHTDLKTSLLTLSSHSYLKCMSYGIPVAELVSSPLPITPTVIFTTKRLQGATSDEYLVLS
SSLSSQTLVLSIGEVVEEVKDSCFVTDQYTLGVQQVGKCSVIQIHTNGIRHIKHLLDDGG
KHIVDKKLTDWYPPAGIHVVHVSANEAQVILGLSNREICYFEVDSTDDQLAEYQEKHEVS
SDLITAIAILGTSSNRKSDFAAVACADETIQILSLHPDRVFETITLQALSSKCTSLLMLP
FDRSSAHLHVGMESGVYARIQMDTLTGKLSDTRSKYVGSRSVSLSPLKLPNTELLGILAI
SSNPWIGYQNVENQFKLMPLLGSDIISGSSFYSEDIGTESVVGISGSDMTIFTIGNDETG
FNLNDEFHSESTKLRFQPRKHLFDTKSNCVIILESEADTVSPYSLSDGDVDEDYYQAFGY
DRKTGSWASCLQIIGLEDKEVSQSISFDDNVCFLSLTFASFNDNEHVVISFSENHSILPP
SASSYGLYVYKIRRQKGSCLKLDFVHKTILDGPVTAMISFEGKLLVGVKSSLRLLDLGQK
QMLRKSFTETNFLRRPTQMAYLGESIVVVGDSSESVSYFKFDVAKNQFELLCSDVMKRQV
TAFKMLDFSTLIGGDKFGNIFVSRLPDDLRTQLNNNVLLRFNDDALDASSKLQSKCEFYV
EDIPTSFSKGTFVVGGKESIVYTGLRGTVGLLIPLSTKSEIELLRNLEAELRAYFFTEFD
EFDPKKHGKNLLGKDQHKFRSYYNPAKNVVDGDFVERFHEVSASQKIRIASKLGRTPREI
EKKLYDVRNRSAF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgatgatactttatgtctctataatctcacgctcaagcagccttcactgccg
tttcaatctattgttggtcaattttctggcgtgaagaaggtcgaggagcttgtactcata
tcgaccactatcatagaagtttaccaaccaaaggcagatacgggtaaactaaacaaagtt
tcgctgcaacctgtgttcggaatcatccaaaaatgtacaaagttaagactactagaaaca
caaaaagacgttcttgtgctcactgctgattcaggcaacataatcattgcaactctcaac
gatgaaaccaaaaaatttgagccactaatacaggagccacactccaagaatggtcttcga
cggatctttcccggcgagtacctcagctcaaatccgcagaatcgagcaattatgattggt
gctttggaaagaactaagtttgtgtatagagtggagatggagcacggaacaggtcaatta
aagctctcgtcccctctagaatcttatagcccgggtttcctcactgtcgacctttgccct
cttgatacatcatacgaaaaccccctttgggctgcaattgaggtagacacatcggaattt
gaagaaaagaaatacgtgacgtcggaatcgccgctgcaattgagatattacgaattagac
cagggtcttaatcacatcgttcagaagaagagcaaatcgactataccagctcacgcaagt
cttcttatcccggtaccaggacatatcggtggcgttttgatagtgtgcgactcctacatt
atatacgagaagggaccagaaagtgagagactctacctatctcttccaagaagaaatggg
tctgatacaacggctatagtttgtttctgctcgcatatcctaaagaagaccgactttttt
gtcctcatgcaaagctccttgggtgacttattcaagttgacctttgactacaacaaagat
accgagcaagtgaacagcttatcagtgacatattttgatacaatcccagtatgcaacact
atcaacatcatccgggcaggattcatgtttgccaatgttgcaaatgacagcaaattactt
tatcaatttgaaaaattgggcgaggagaatgaaactacttcaagatcatcctcaaaaatt
accacagtagaggaatgtggtatgttttctccgaggggattggagaacttggcattagtc
gacattttggagactttagggccaatcgcctcatctgaaacagttcaacaaaggtctcaa
aaacatacagatttgaaaacgctgttgcttaccctctcttctcattcttacctaaaatgt
atgtcttacggtatacccgttgcagagcttgtctcatctcctttgcccatcactcctacg
gtcatttttaccacgaagagacttcaaggtgcaacaagcgacgagtacttagtactttca
tctagtctttcctcacaaacccttgtcttgtctataggtgaggttgtggaagaagtaaag
gactcttgttttgtgactgaccagtatacccttggagttcagcaagtcggaaaatgttct
gtgattcagatacatacaaatggtatacgacacatcaaacatcttcttgacgacggaggt
aagcacattgttgataaaaagctaaccgactggtatccacctgccggtatccacgttgtc
catgttagcgcaaacgaggcgcaagtcatcttaggactctccaatcgtgaaatttgctac
ttcgaggttgattctacggatgatcaactcgcagagtatcaagaaaagcatgaagttagt
tctgatctcatcactgctattgccatattgggcacctcatcaaatcggaaaagtgatttt
gcagctgttgcatgtgccgatgaaacgatccaaatattatcattacacccagatcgagtc
tttgagactatcacacttcaggcgctatcatcaaaatgcacatcattgttaatgttgcct
ttcgatcgtagctctgctcatcttcatgttggtatggaaagtggagtctatgcaagaata
caaatggataccttgacgggtaaattactggatacccgtctgaaatacgtggggtctcgg
tctgtatcattgagcccattgaagcttcccaatacggaacttcttggaatattggctatc
agttccaatccatggatagggtaccagaatgttgagaatcaattcaaattgatgcctttg
cttggatctgacatcataagtggtctgtcattctactctgaagatattgggactgagagt
gttgtaggaatcagcggaagcgacatgaccatcttcaccattggaaatgacgagactggt
ttcaatttgaatgacgagtttcattcggagctgacaaaattacgctttcagcccagaaag
catttattcgacaccaagagcaattgtgtgattatccttgaatctgaagctgacacagta
tcgccatatctgttgtcagatggagatgtagatgaggattactaccaggcatttggttat
gatagaaaaactggcctgtgggcttcatgtttgcagataatcggcctagaagacaaagag
gtttcacaatcgatatcttttgatgacaacgtctgcttcctttcattgactttcgcttcc
ttcaatgataatgagcacgttgtgatctcgttcagtgagaatcattcaatccttccgcct
tcagcctcgtcatatggtctttatgtttataagataaggaggcaaaaaggaagctgtctt
aagttggattttgtgcacaagactatacttgatggtcctgttactgcgatgatatccttt
gaaggaaagcttctcgttggagtcaagagctctttacggctccttgatctaggtcaaaaa
cagatgctccgaaaatcattcactgaaacgaattttctacgtcgccccacacaaatggcc
tatcttggtgagagtattgttgtcgttggtgattcaagtgagtctgtttcatatttcaaa
ttcgatgtcgcaaaaaatcaattcgaactactttgcagtgacgtaatgaagcgacaagtg
acagctttcaaaatgcttgacttcagtaccttgatcggaggtgacaaatttggtaatata
tttgtgtcccggctcccagatgacttaaggactcaactcaataataacgtgctccttaga
tttaatgacgacgctttagatgcctcgagcaaacttcagagcaaatgtgaattttacgtg
gaggacatcccaacttcgttttcaaaaggaacttttgttgttggtggcaaggagagcatt
gtctacaccggtctacgaggaacagtgggcttgttgataccgttgtctaccaagctggaa
atcgagctcttgagaaatcttgaggctgaacttcgagcctacttcttcaccgaatttgat
gaatttgatccaaaaaagcatggcaaaaacttgttgggcaaggatcaacataagtttcgg
tcgtactataatcctgccaaaaatgttgtcgatggagactttgttgaacgatttcacgaa
gtaagtgcgtcccaaaaaattagaatcgccagcaaattgggaagaacgcctagagagatt
gaaaagaaactttacgatgttagaaatagatctgcattttaa
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integrated database retrieval system