KEGG   Candidozyma auris: CJI96_0000700
Entry
CJI96_0000700     CDS       T04850                                 
Name
(RefSeq) U2 snRNP complex subunit RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
caur  Candidozyma auris
Pathway
caur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CJI96_0000700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caur03021]
    CJI96_0000700
   03041 Spliceosome [BR:caur03041]
    CJI96_0000700
   03036 Chromosome and associated proteins [BR:caur03036]
    CJI96_0000700
Transcription machinery [BR:caur03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     CJI96_0000700
Spliceosome [BR:caur03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CJI96_0000700
 Complex B
    CJI96_0000700
 Complex C
   U2 SnRNP specific factors
    CJI96_0000700
Chromosome and associated proteins [BR:caur03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     CJI96_0000700
    TFTC complex
     CJI96_0000700
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 40028063
NCBI-ProteinID: XP_028890171
LinkDB
Position
1:complement(1524980..1528621)
AA seq 1213 aa
MIPDDTLCLYNLTLKQPSSPFQSIVGQFSGVKKVEELVLISTTIIEVYQPKADTGKLNKV
SSQPVFGIIQKCTKLRLLETQKDVLVLTADSGNIIIATLNDETKKFEPLIQEPHSKNGLR
RIFPGEYLSSNPQNRAIMIGALERTKFVYRVEMEHGTGQLKLSSPLESYSPGFLTVDLCP
LDTSYENPLWAAIEVDTSEFEEKKYVTSESPSQLRYYELDQGLNHIVQKKSKSTIPAHAS
LLIPVPGHIGGVLIVCDSYIIYEKGPESERLYLSLPRRNGSDTTAIVCFCSHILKKTDFF
VLMQSSLGDLFKLTFDYNKDTEQVNSLSVTYFDTIPVCNTINIIRAGFMFANVANDSKLL
YQFEKLGEENETTSRSSSKITTVEECGMFSPRGLENLALVDILETLGPIASSETVQQRSQ
KHTDLKTSLLTLSSHSYLKCMSYGIPVAELVSSPLPITPTVIFTTKRLQGATSDEYLVLS
SSLSSQTLVLSIGEVVEEVKDSCFVTDQYTLGVQQVGKCSVIQIHTNGIRHIKHLLDDGG
KHIVDKKLTDWYPPAGIHVVHVSANEAQVILGLSNREICYFEVDSTDDQLAEYQEKHEVS
SDLITAIAILGTSSNRKSDFAAVACADETIQILSLHPDRVFETITLQALSSKCTSLLMLP
FDRSSAHLHVGMESGVYARIQMDTLTGKLSDTRSKYVGSRSVSLSPLKLPNTELLGILAI
SSNPWIGYQNVENQFKLMPLLGSDIISGSSFYSEDIGTESVVGISGSDMTIFTIGNDETG
FNLNDEFHSESTKLRFQPRKHLFDTKSNCVIILESEADTVSPYSLSDGDVDEDYYQAFGY
DRKTGSWASCLQIIGLEDKEVSQSISFDDNVCFLSLTFASFNDNEHVVISFSENHSILPP
SASSYGLYVYKIRRQKGSCLKLDFVHKTILDGPVTAMISFEGKLLVGVKSSLRLLDLGQK
QMLRKSFTETNFLRRPTQMAYLGESIVVVGDSSESVSYFKFDVAKNQFELLCSDVMKRQV
TAFKMLDFSTLIGGDKFGNIFVSRLPDDLRTQLNNNVLLRFNDDALDASSKLQSKCEFYV
EDIPTSFSKGTFVVGGKESIVYTGLRGTVGLLIPLSTKSEIELLRNLEAELRAYFFTEFD
EFDPKKHGKNLLGKDQHKFRSYYNPAKNVVDGDFVERFHEVSASQKIRIASKLGRTPREI
EKKLYDVRNRSAF
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgatacctgatgatactttatgtctctataatctcacgctcaagcagccttcactgccg
tttcaatctattgttggtcaattttctggcgtgaagaaggtcgaggagcttgtactcata
tcgaccactatcatagaagtttaccaaccaaaggcagatacgggtaaactaaacaaagtt
tcgctgcaacctgtgttcggaatcatccaaaaatgtacaaagttaagactactagaaaca
caaaaagacgttcttgtgctcactgctgattcaggcaacataatcattgcaactctcaac
gatgaaaccaaaaaatttgagccactaatacaggagccacactccaagaatggtcttcga
cggatctttcccggcgagtacctcagctcaaatccgcagaatcgagcaattatgattggt
gctttggaaagaactaagtttgtgtatagagtggagatggagcacggaacaggtcaatta
aagctctcgtcccctctagaatcttatagcccgggtttcctcactgtcgacctttgccct
cttgatacatcatacgaaaaccccctttgggctgcaattgaggtagacacatcggaattt
gaagaaaagaaatacgtgacgtcggaatcgccgctgcaattgagatattacgaattagac
cagggtcttaatcacatcgttcagaagaagagcaaatcgactataccagctcacgcaagt
cttcttatcccggtaccaggacatatcggtggcgttttgatagtgtgcgactcctacatt
atatacgagaagggaccagaaagtgagagactctacctatctcttccaagaagaaatggg
tctgatacaacggctatagtttgtttctgctcgcatatcctaaagaagaccgactttttt
gtcctcatgcaaagctccttgggtgacttattcaagttgacctttgactacaacaaagat
accgagcaagtgaacagcttatcagtgacatattttgatacaatcccagtatgcaacact
atcaacatcatccgggcaggattcatgtttgccaatgttgcaaatgacagcaaattactt
tatcaatttgaaaaattgggcgaggagaatgaaactacttcaagatcatcctcaaaaatt
accacagtagaggaatgtggtatgttttctccgaggggattggagaacttggcattagtc
gacattttggagactttagggccaatcgcctcatctgaaacagttcaacaaaggtctcaa
aaacatacagatttgaaaacgctgttgcttaccctctcttctcattcttacctaaaatgt
atgtcttacggtatacccgttgcagagcttgtctcatctcctttgcccatcactcctacg
gtcatttttaccacgaagagacttcaaggtgcaacaagcgacgagtacttagtactttca
tctagtctttcctcacaaacccttgtcttgtctataggtgaggttgtggaagaagtaaag
gactcttgttttgtgactgaccagtatacccttggagttcagcaagtcggaaaatgttct
gtgattcagatacatacaaatggtatacgacacatcaaacatcttcttgacgacggaggt
aagcacattgttgataaaaagctaaccgactggtatccacctgccggtatccacgttgtc
catgttagcgcaaacgaggcgcaagtcatcttaggactctccaatcgtgaaatttgctac
ttcgaggttgattctacggatgatcaactcgcagagtatcaagaaaagcatgaagttagt
tctgatctcatcactgctattgccatattgggcacctcatcaaatcggaaaagtgatttt
gcagctgttgcatgtgccgatgaaacgatccaaatattatcattacacccagatcgagtc
tttgagactatcacacttcaggcgctatcatcaaaatgcacatcattgttaatgttgcct
ttcgatcgtagctctgctcatcttcatgttggtatggaaagtggagtctatgcaagaata
caaatggataccttgacgggtaaattactggatacccgtctgaaatacgtggggtctcgg
tctgtatcattgagcccattgaagcttcccaatacggaacttcttggaatattggctatc
agttccaatccatggatagggtaccagaatgttgagaatcaattcaaattgatgcctttg
cttggatctgacatcataagtggtctgtcattctactctgaagatattgggactgagagt
gttgtaggaatcagcggaagcgacatgaccatcttcaccattggaaatgacgagactggt
ttcaatttgaatgacgagtttcattcggagctgacaaaattacgctttcagcccagaaag
catttattcgacaccaagagcaattgtgtgattatccttgaatctgaagctgacacagta
tcgccatatctgttgtcagatggagatgtagatgaggattactaccaggcatttggttat
gatagaaaaactggcctgtgggcttcatgtttgcagataatcggcctagaagacaaagag
gtttcacaatcgatatcttttgatgacaacgtctgcttcctttcattgactttcgcttcc
ttcaatgataatgagcacgttgtgatctcgttcagtgagaatcattcaatccttccgcct
tcagcctcgtcatatggtctttatgtttataagataaggaggcaaaaaggaagctgtctt
aagttggattttgtgcacaagactatacttgatggtcctgttactgcgatgatatccttt
gaaggaaagcttctcgttggagtcaagagctctttacggctccttgatctaggtcaaaaa
cagatgctccgaaaatcattcactgaaacgaattttctacgtcgccccacacaaatggcc
tatcttggtgagagtattgttgtcgttggtgattcaagtgagtctgtttcatatttcaaa
ttcgatgtcgcaaaaaatcaattcgaactactttgcagtgacgtaatgaagcgacaagtg
acagctttcaaaatgcttgacttcagtaccttgatcggaggtgacaaatttggtaatata
tttgtgtcccggctcccagatgacttaaggactcaactcaataataacgtgctccttaga
tttaatgacgacgctttagatgcctcgagcaaacttcagagcaaatgtgaattttacgtg
gaggacatcccaacttcgttttcaaaaggaacttttgttgttggtggcaaggagagcatt
gtctacaccggtctacgaggaacagtgggcttgttgataccgttgtctaccaagctggaa
atcgagctcttgagaaatcttgaggctgaacttcgagcctacttcttcaccgaatttgat
gaatttgatccaaaaaagcatggcaaaaacttgttgggcaaggatcaacataagtttcgg
tcgtactataatcctgccaaaaatgttgtcgatggagactttgttgaacgatttcacgaa
gtaagtgcgtcccaaaaaattagaatcgccagcaaattgggaagaacgcctagagagatt
gaaaagaaactttacgatgttagaaatagatctgcattttaa

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