KEGG   Candidozyma auris: CJI96_0000760
Entry
CJI96_0000760     CDS       T04850                                 
Name
(RefSeq) mRNA splicing protein SMD3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
caur  Candidozyma auris
Pathway
caur03040  Spliceosome
caur04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CJI96_0000760
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    CJI96_0000760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caur03019]
    CJI96_0000760
   03041 Spliceosome [BR:caur03041]
    CJI96_0000760
   03032 DNA replication proteins [BR:caur03032]
    CJI96_0000760
Messenger RNA biogenesis [BR:caur03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CJI96_0000760
Spliceosome [BR:caur03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CJI96_0000760
  U2 snRNP components
    CJI96_0000760
 Complex B
  U1 snRNP components
    CJI96_0000760
  U4/U6.U5 tri-snRNP components
    CJI96_0000760
 Complex C
  U2 snRNP components
    CJI96_0000760
DNA replication proteins [BR:caur03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CJI96_0000760
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 40028143
NCBI-ProteinID: XP_028890248
LinkDB
Position
1:complement(1640365..1640685)
AA seq 106 aa
MSISVPVKLLNEAQGHIVSLELTNGDTYRGKLQESEDNMNVSLDEVTITKGKTGETSFKN
QVFVRGSMIRFVSVPDILQYAPMFFMKPGEKPKPPVRGPPPKRTKH
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcgatcagtgtccccgtaaagcttctaaacgaggctcaaggccatatcgtctctttg
gaactcacgaatggcgacacatacagaggaaagttgcaagaatctgaggacaacatgaac
gtctctctcgatgaagtcacaataaccaagggcaaaaccggtgaaacctccttcaagaac
caagttttcgtgagaggctccatgatacgatttgtgagtgttcctgacatcttacaatat
gctccaatgtttttcatgaagcccggtgagaaacccaagcccccggtgagggggccccca
ccaaagagaacgaaacactga

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