Candidozyma auris: CJI96_0000878
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Entry
CJI96_0000878 CDS
T04850
Name
(RefSeq) linker nucleoporin NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
caur
Candidozyma auris
Pathway
caur03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CJI96_0000878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0000878
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CJI96_0000878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
40028266
NCBI-ProteinID:
XP_028890367
LinkDB
All DBs
Position
1:complement(1873728..1876742)
Genome browser
AA seq
1004 aa
AA seq
DB search
MSLFGSNNSAASIPSGGSGFTFGASQSTQQKQESQGTQGPSLFGQSSQQQNQQQQPNSNS
STMATSAFEKSTNLTSNTSSISPEGSSGKVLKDLLESASNLPKLDYNSLGTINLPLNELR
NRTKLLSKNESEAGFTKAHYLLSGSGINAGDIEVELNNIRGLAPSSRQTKQLHELQAQQE
QQQKPSDKPSQEDRLVAREAVQSPALTTGINNIENYLRAKKDENILNAIESSLVTASRDF
DNFIAKNITIDWRVRKDHLKRSLGIPVKTKISPEELSKSFTWNQSQPGNYRILTPLKQKA
GTSSSVRHFTREKFESHAKLIYSLNEARLKQLPFPIASSFEEVNKANQDLKSKQMADTWK
VIANLTDEKFVKHNQEQAFYEDYQNKKDCISLKKRIVANSRSCLEKQFFDYMDEFYTKDD
QKIPEYSVPSNINKVSHFISKVIGKKNGNEVSQQTLQVNGVPIWALIYYLMRSGLYNEAV
QLTNQRRELFEKFDKNFPVYISAHVRNQCFGLPATLQERLSSDFNQTFQFLDEKSPNFDP
YKYAVYKVIGKCDLAKKSLPAAVNLSIEEWLWFHLNLINEFNFDASSSLIYENYRLENLQ
KKVLAIGPEKLNASSNNPVYLKTLTMIGLYELAVKYAYENINECDAVHFATGLCYYGLLR
VTSQPTDDLLTLNGSDEYEINLSRILGSYTRSFKISDPKVAVQYLVLICMAKGGKSTEET
AKCHEALRELILITREFTLLLGELNEVTGEKSPGILEKQRSLIGLADLSSFQRTIVDVSA
SRCEEEGRVFDALLLHQLSQDYNVVVRLINQYVSETLSMSELDKPLLSEKIPSGGEGQSQ
SSENNFISRSKHIMGIYNNNSAILEKVSPEVKKVNDALLQIVDIRESFAARNWRDSLSAL
QKLPFFAALNSNDFVEVRNSAESLTSYHVALVRVIPSLLVMIMTSVAQLTHNIKSKRFGS
FGGEKDELAYLRKIAKNCVVYAGLVQYRMPRETYSLLVNLESQL
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctttggttcaaacaattctgctgcttctataccttctggtgggctggggttt
acttttggagctctgcaaagcacccagcagaaacaagaaagtcagggcacgcaaggccca
tctctttttggtcagtcatctcagcagcagaatcaacagcaacagcctaattcaaatctg
ctgaccatggcaacctctgcttttgagaaaagtactaacctcacatccaatacttcctca
attagccctgagggatcatctggaaaggtgttgaaggaccttttggaatctgcaagcaac
ttgcccaaattggactataacagcctcggtacgatcaacttgcccttgaatgaattgcgg
aatcgcacgaagctcttatcaaaaaatgagagcgaggctggatttactaaagcacattac
cttctttctggtagtggcataaatgctggcgacattgaagtcgaattgaataacattcgt
ggactcgctccttcttcaaggcagactaagcagctccatgaactacaagcacagcaagag
caacagcaaaagccatcagataaaccttcgcaagaagacagactcgtggcgcgtgaggcc
gttcaatcccctgcccttactactggcatcaataatattgagaattatcttcgtgctaag
aaagacgaaaatattttgaatgccatagagctgtcacttgtcactgcttctcgtgacttt
gataatttcattgcgaagaatatcactatagactggagagtacgcaaggatcacttgaaa
agaagtctaggcattccagtgaaaaccaaaataagccccgaagaactctccaaatcattt
acctggaatcagtcacaacctggtaattatcgcatattgactcctttgaagcaaaaagca
ggcacttcatctagtgttcgtcattttacccgtgaaaaattcgagagtcatgctaaatta
atctatctgctcaatgaagccaggttaaagcagctaccctttccaattgcatcaagcttt
gaagaggtaaacaaagcaaatcaggatctcaaatcaaagcaaatggccgacacgtggaag
gtgattgcaaacttgacagacgaaaagtttgtgaaacataatcaagagcaggcgttctac
gaggattatcaaaacaaaaaggactgtatttctttgaagaaacgtattgttgctaactca
agatcctgtttggaaaaacagttctttgactacatggacgaattctatacaaaagatgac
cagaaaatccccgaatacagcgtccctagcaacatcaataaagtttctcacttcatctca
aaggttatcggcaaaaagaatggcaatgaagtatcgcagcaaacacttcaagtaaatggg
gttcccatctgggcgcttatctactacctcatgcgcagtggtctctacaatgaggctgtt
cagctcacgaaccaaagacgggagctttttgagaagtttgacaaaaactttccagtctac
atatcggcgcatgtgagaaatcaatgtttcggcttgcctgcaactctacaagaaagatta
tcctctgacttcaaccagacctttcaatttttggatgagaagtcacccaacttcgatccc
tacaagtatgcggtatacaaagtgattggcaagtgcgatttggccaagaaaagtcttccg
gcagcagtcaatcttagcatagaagaatggttgtggttccacttaaatctcataaatgag
ttcaactttgacgcatcctcgagtttgatttacgaaaattatagactcgaaaacctccag
aagaaagtcttggccatcggcccagaaaaattgaacgcttcttcaaataatcccgtatac
cttaagacattgacgatgattgggttgtatgagcttgcggtgaagtacgcctacgaaaat
atcaatgagtgtgatgcagtccactttgcgactggattgtgctattatggtttgcttaga
gtgacaagtcaaccaactgacgacttgttgacattgaatggatctgatgagtatgagatc
aatttaagcagaattcttggttcgtatacccggagttttaagataagtgatcctaaggtc
gctgttcaatacttagttctcatctgcatggcaaagggtggaaagtctactgaggagact
gctaaatgtcatgaggctttgcgagagcttatcctcattactcgtgagtttactttgctt
ttaggcgagctcaatgaggtgactggggagaaactgcctggtattcttgagaagcaacgg
tcgcttattgggttggccgacttatccagcttccagcgtacgatcgttgacgtcagtgct
tcaaggtgtgaagaagagggaagagtattcgatgcacttcttcttcaccaattgagccag
gactacaacgttgttgtacgtctcatcaatcaatatgttagtgagacgttatcaatgtct
gaattagacaaaccattactttctgagaagatcccatctggcggtgagggacaactgcag
agcagtgagaataatttcatcctgcgcagcaagcacattatgggcatttacaacaacaac
agcgcaatcttggaaaaggtatctccagaagtaaagaaggtcaatgatgctttgttgcag
attgtcgatatacgtgaaagctttgcagccagaaattggcgcgacagtttaagcgctctt
caaaaattaccattctttgcggctctcaacagcaatgattttgtggaggtgagaaactca
gcggagtctttgacaagctaccatgtcgctcttgttcgggtgattccttcgttactagtg
atgattatgacgagtgtcgcccagctcacccacaacataaagtccaaacgctttggctcg
ttcggcggtgaaaaggatgagttggcatatctccgaaagattgccaaaaactgcgtcgtc
tacgctggactagtccagtaccgaatgcctcgagagacatacagcttgcttgtgaacctc
gagctgcaactctag
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