Candida auris: CJI96_0000916
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Entry
CJI96_0000916 CDS
T04850
Name
(RefSeq) pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
caur
Candida auris
Pathway
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0000916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caur03041
]
CJI96_0000916
03009 Ribosome biogenesis [BR:
caur03009
]
CJI96_0000916
Enzymes [BR:
caur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CJI96_0000916
Spliceosome [BR:
caur03041
]
Complex A
U2 snRNP components
U2 related factors
CJI96_0000916
Complex B
CJI96_0000916
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CJI96_0000916
Ribosome biogenesis [BR:
caur03009
]
Eukaryotic type
90S particles
Helicases
CJI96_0000916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
AAA_30
Motif
Other DBs
NCBI-GeneID:
40025337
NCBI-ProteinID:
XP_028892591
LinkDB
All DBs
Position
1:complement(1959990..1962233)
Genome browser
AA seq
747 aa
AA seq
DB search
MGDKKKHKKQKLMDSEAEKVAELAEESLREHPHPQPPQKMEFHDGGEFKGVERHNTTAHS
AEKLEDGPQNPFTGEKFSQKYFDILKTRRDLPVHAQRDEFLKTFQSTQIMVFVGETGSGK
TTQIPQFVLYDDMPHLHGKMVACTQPRRVAAMSVAKRVADELDVQLGDEVGYSIRFENKT
SPKTILKYMTDGMLLREAMEDHDLSRYSCIMLDEAHERTLATDILMGLLKQVTMRRPDLK
LIIMSATLDAEKFQQYFHNAPLLAVPGRTHPVEIYYTPEYQKDYLDAAIRTVLQIHATED
EGDVLLFLTGEEEIEDACRKIQLEGDELIREQDCGPLKVYPLYGSLPPHQQQKIFEPAPE
NHKPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS
AQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLASTVLELKKLGVDDLVHF
DFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASNFPLDPMLAVMLIGSPAFKCSE
EILSIVALLSVPNVFVRPASARKRADEIKMSFAHPDGDHLTLLNVYEAFNSYEAYEIGLH
QWCRDNFLSYRSLTSAKNVRSQLRRLMERYDLELVSTPFEDRNYWDNIRKALVAGFFMQV
AKKKSGNKGFLTVKDNQDVLIHPSTTLAKENEWVIYNEFVLTSKNYIRTVTNVRPEWLVE
LAPKYYNLDHFSRGDVKLSLERVIGKR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaaaaaagcacaaaaaacagaagttgatggattcagaagctgagaaagtg
gcagagttggcagaggaaagcttgagagaacaccctcacccacaacctccgcaaaagatg
gaattccacgatggaggtgagttcaagggtgttgaaagacacaacaccacggctcatctg
gcagagaaacttgaagacgggccccaaaacccatttactggagaaaagttttctcagaag
tacttcgacattttgaaaacaagaagagatttgcccgtgcatgcccagagagatgagttt
ctcaagactttccaaagcacccaaatcatggttttcgtgggtgagaccggttctggtaaa
acaacccagattcctcaatttgtcttgtatgatgacatgcctcacctccacgggaaaatg
gttgcttgtacccaacctagaagagtggcggccatgtcggttgccaaaagagtcgctgat
gaattggacgtgcaacttggcgacgaagtcggatacctgatcagattcgaaaataaaact
tccccaaagactattctcaagtatatgacagatggtatgcttttgcgagaggcaatggag
gaccatgacttgctgagatactcgtgtatcatgctagacgaggcccacgagcgtaccttg
gcaacagacatattgatggggcttttgaaacaagtcaccatgcgcagaccagatctcaaa
cttataatcatgtcagccacgttagacgctgagaaatttcagcaatactttcacaacgct
ccacttttagctgttccaggtcgtactcaccctgtggaaatctactacactccagaatat
caaaaagattatttggatgctgccataagaacagtcttgcaaattcatgccacagaagac
gagggtgatgttcttttatttttgacgggtgaagaggaaattgaagatgcttgcagaaag
atccaacttgagggcgatgagctaatccgtgagcaggattgtgggccactcaaggtgtac
ccattgtatggttcattacctcctcatcaacagcaaaaaatttttgagccagcaccagag
aaccataaacccggcggaagaccgggaagaaaggttattgtgtcaacaaacattgctgag
acttcgcttaccatcgatggtatcgtgtacgtggttgatcctggtttctccaagcagaaa
gtgtacaatccccgtatcagagtcgaatccttgttagtctctccaatctccaaagcatct
gcccaacaaagagctggtcgtgctggtcgtacgcggcccggtaagtgtttcagattgtac
actgaagaagcattcaagaaggagttgattgagcagtcctaccccgagattttgcgttct
aacttggcttctactgttcttgaactcaagaaattgggtgtcgatgatttggttcacttt
gatttcatggaccctccagcaccagagacaatgatgcgtgctcttgaagagctcaactac
ctacagtgtctctctgacgaaggtgacttgactgcattgggacgtttagcatcaaatttc
cctcttgatccaatgttggcggtcatgttgataggatctccagcattcaagtgttccgaa
gagattctttcgatcgttgcacttttgtctgtccccaacgtgttcgttcgcccagcgtct
gctagaaagagagcggacgagatcaagatgtcgtttgctcaccccgatggtgaccacttg
acattgcttaatgtctacgaggctttcaactcctacgaagcatatgaaattggcttgcac
cagtggtgcagagacaacttcttgtcataccgttccctcacgtcagccaagaatgttcgg
tctcaattgcgtcgtcttatggaacgttacgatttggagttggtgctgacgccgtttgag
gaccgcaactactgggacaacatcagaaaggcacttgtagctggatttttcatgcaagtt
gctaagaagaagagcggcaacaaaggatttctcactgtaaaggacaatcaggacgtgttg
attcacccaagcacaacgcttgccaaggagaatgagtgggtcatatacaacgagtttgtt
ctcacgtccaagaactatatccgtacggtgacaaatgtacgtcctgagtggttggttgag
ttggcgcccaaatactacaacttagatcacttctcccgtggagacgtgaagctctcattg
gagagggtcattggcaaaaggtaa
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